RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	DGKE	P52429	567 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	ZNF134	P52741	427 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	ALDH18A1	P54886	795 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	LOXL3	P58215	753 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	LINC00310	P59036	64 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	ELAVL1	Q15717	326 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	VMAC	Q2NL98	169 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	ZIK1	Q3SY52	487 aa	Predicted RBP	5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	MANEAL	Q5VSG8	457 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	LAYN	Q6UX15	382 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SLC30A10	Q6XR72	485 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	RASGRP3	Q8IV61	690 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	CPO	Q8IVL8	374 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	TMEM151B	Q8IW70	566 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	ESX1	Q8N693	406 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SDCCAG3	Q96C92	435 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	MPHOSPH9	Q99550	1183 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SLC26A6	Q9BXS9	759 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	KRTAP4-8	Q9BYQ9	185 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SLC25A32	Q9H2D1	315 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	PLA2G3	Q9NZ20	509 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	TMOD4	Q9NZQ9	345 aa		5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	VSX1	Q9NZR4	365 aa	Predicted RBP	5.79	□□□□□ -1.48
CTNNA1-233	ENST00000522052	TISP43	B9A030	160 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	DNPH1	O43598	174 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	CCNT2	O60583	730 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SOAT2	O75908	522 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	MBD4	O95243	580 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SRGAP2B	P0DMP2	458 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	RXRG	P48443	463 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	PXN	P49023	591 aa	Predicted RBP	5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	BCAT1	P54687	386 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	EPHB4	P54760	987 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	TLE2	Q04725	743 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	ATP1A4	Q13733	1029 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	METRNL	Q641Q3	311 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	TAX1BP1	Q86VP1	789 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SYT12	Q8IV01	421 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	RHOT2	Q8IXI1	618 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	LGI4	Q8N135	537 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	NSUN7	Q8NE18	718 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SCAMP5	Q8TAC9	235 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	LRIG1	Q96JA1	1093 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	MAEL	Q96JY0	434 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	EPS8L2	Q9H6S3	715 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SEPSECS	Q9HD40	501 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	UBN1	Q9NPG3	1134 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	RASSF1	Q9NS23	344 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	SH3BP1	Q9Y3L3	701 aa		5.78	□□□□□ -1.48
CTNNA1-233	ENST00000522052	HOXC11	O43248	304 aa	Predicted RBP	5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	RGS10	O43665	173 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	VIP	P01282	170 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ANXA6	P08133	673 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SPATA31D3	P0C874	917 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	AR	P10275	920 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	XBP1	P17861	261 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	HK1	P19367	917 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	KCNA3	P22001	575 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ELF1	P32519	619 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	PRKAA2	P54646	552 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	EIF5	P55010	431 aa	Known RBP	5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SCAP	Q12770	1279 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	MYO1E	Q12965	1108 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CUL4B	Q13620	913 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SURF1	Q15526	300 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	KCNA10	Q16322	511 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	AGAP9	Q5VTM2	703 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	C1orf122	Q6ZSJ8	110 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SPATA31D4	Q6ZUB0	917 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	NRSN1	Q8IZ57	195 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	OR6Y1	Q8NGX8	325 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	AFG1L	Q8WV93	481 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	PPP2R3C	Q969Q6	453 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ZNF668	Q96K58	619 aa	Predicted RBP	5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	OR14A2	Q96R54	314 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	MED15	Q96RN5	788 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TRIM5	Q9C035	493 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	MEGF9	Q9H1U4	602 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TAF1D	Q9H5J8	278 aa	Predicted RBP	5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CTTNBP2NL	Q9P2B4	639 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	HSFX1	Q9UBD0	423 aa		5.77	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ITIH6	Q6UXX5	1313 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052		E7ENX8	843 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SNX2	O60749	519 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SRGAP2	O75044	1071 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	FARP2	O94887	1054 aa	Predicted RBP	5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TSPAN15	O95858	294 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CD4	P01730	458 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	PRKCB	P05771	671 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	LDHC	P07864	332 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	KCNC1	P48547	511 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	AARS	P49588	968 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ACTR2	P61160	394 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TAP2	Q03519	686 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	GPS1	Q13098	491 aa		5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.76	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TSHZ3	Q63HK5	1081 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms