RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 ARL14EPQ8N8R7 260 aaPredicted RBP17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 PCED1BQ96HM7 432 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 PKMYT1Q99640 499 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 GMEB2Q9UKD1 530 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 ATP6V1DQ9Y5K8 247 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 TADA3O75528 432 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 ARSAP15289 507 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 WEE1P30291 646 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 MAGEA11P43364 429 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 RAP1GAPP47736 663 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 AMPD2Q01433 879 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 GRSF1Q12849 480 aaKnown RBP eCLIP17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 STK4Q13043 487 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 PSMD2Q13200 908 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 MTF1Q14872 753 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 ZNF667Q5HYK9 610 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 FAM171BQ6P995 826 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 VSTM1Q6UX27 236 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 DENND5BQ6ZUT9 1274 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 CPA6Q8N4T0 437 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 KIAA0895Q8NCT3 520 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 MYCBPAPQ8TBZ2 947 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 ELMO3Q96BJ8 720 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 TRMT2BQ96GJ1 504 aaKnown RBP17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 CYP2S1Q96SQ9 504 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 DPEP3Q9H4B8 488 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 MMRN2Q9H8L6 949 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 DUS2Q9NX74 493 aaKnown RBP17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 EHD2Q9NZN4 543 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 TRPM5Q9NZQ8 1165 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 USP25Q9UHP3 1055 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 USP18Q9UMW8 372 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 FRMD4BQ9Y2L6 1034 aa17.22■□□□□ 0.35
IGHV3-42-201ENST00000520410 ATP8B3O60423 1300 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 C2orf78A6NCI8 922 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 LRRIQ3A6PVS8 624 aaPredicted RBP17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 F8VP50 259 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 CALUO43852 315 aaPredicted RBP17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 KLRC4O43908 158 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 KIF20AO95235 890 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 NR3C1P04150 777 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 RPN1P04843 607 aaKnown RBP17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 PTPN1P18031 435 aaKnown RBP17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 CMA1P23946 247 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 ATICP31939 592 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 MLLT6P55198 1093 aaPredicted RBP17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 FAM160A1Q05DH4 1040 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 C12orf56Q8IXR9 622 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 SPEM1Q8N4L4 309 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 ZNF516Q92618 1163 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 EXOC4Q96A65 974 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 FAM126AQ9BYI3 521 aaPredicted RBP17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 SMYD3Q9H7B4 428 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 WNT6Q9Y6F9 365 aa17.21■□□□□ 0.35
IGHV3-42-201ENST00000520410 ZFHX2Q9C0A1 2572 aaPredicted RBP17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 CACNA1HO95180 2353 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 CHURC1-FNTBB4DL54 471 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 CLDN5O00501 218 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 TACC1O75410 805 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 P4HA1P13674 534 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 HDCP19113 662 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 PIK3CAP42336 1068 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 FNTBP49356 437 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 PDE6CP51160 858 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 NDUFA8P51970 172 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 AP3M2P53677 418 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 NCOA4Q13772 614 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 PDGFRLQ15198 375 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 TDRD10Q5VZ19 366 aaKnown RBP17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 CEP68Q76N32 757 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 ZNF687Q8N1G0 1237 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 ZBTB44Q8NCP5 570 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 B3GALNT2Q8NCR0 500 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 SH3RF2Q8TEC5 729 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 SLC22A12Q96S37 553 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 ZNF518BQ9C0D4 1074 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 ELOVL4Q9GZR5 314 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 HPS4Q9NQG7 708 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 MAPK8IP1Q9UQF2 711 aa17.2■□□□□ 0.34
IGHV3-42-201ENST00000520410 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 CDH8P55286 799 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 GAS6Q14393 721 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 ZNF268Q14587 947 aaPredicted RBP17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 SUMF1Q8NBK3 374 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 SPATA17Q96L03 361 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 MYRFLQ96LU7 910 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 SLITRK1Q96PX8 696 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 SCAND2PQ9GZW5 306 aaPredicted RBP17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 EPC1Q9H2F5 836 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 GDPD2Q9HCC8 539 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 SLC8A2Q9UPR5 921 aa17.19■□□□□ 0.34
IGHV3-42-201ENST00000520410 SOBPA7XYQ1 873 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 MYL1P05976 194 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 KRT13P13646 458 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 USP46P62068 366 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 DLG4P78352 724 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms