RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 CTNNA1P35221 906 aaKnown RBP13.06□□□□□ -0.32
SPIDR-209ENST00000519141 RGS7P49802 495 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 SLC8A3P57103 927 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 RPL7AP62424 266 aaKnown RBP13.06□□□□□ -0.32
SPIDR-209ENST00000519141 IKBKEQ14164 716 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 MDH1BQ5I0G3 518 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 RSRC2Q7L4I2 434 aaKnown RBP13.06□□□□□ -0.32
SPIDR-209ENST00000519141 ZNF572Q7Z3I7 529 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-209ENST00000519141 CD101Q93033 1021 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 CASD1Q96PB1 797 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 MED10Q9BTT4 135 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 CARD9Q9H257 536 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 PRDM5Q9NQX1 630 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-209ENST00000519141 ZMYND8Q9ULU4 1186 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-209ENST00000519141 PCDHB8Q9UN66 801 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 PRG3Q9Y2Y8 225 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-209ENST00000519141 LTBP2Q14767 1821 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 SIGLEC16A6NMB1 481 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 E5RJQ4 531 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 PGRMC1O00264 195 aaKnown RBP13.05□□□□□ -0.32
SPIDR-209ENST00000519141 SYN1P17600 705 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 TYMPP19971 482 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 TKTP29401 623 aaKnown RBP13.05□□□□□ -0.32
SPIDR-209ENST00000519141 GATMP50440 423 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 ITIH3Q06033 890 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 ELF2Q15723 593 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 ERCC6LQ2NKX8 1250 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 FAM102AQ5T9C2 384 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-209ENST00000519141 PMF1Q6P1K2 205 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 CPNE8Q86YQ8 564 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 FUKQ8N0W3 1084 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 SLC35F5Q8WV83 523 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 TSC1Q92574 1164 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 MCRS1Q96EZ8 462 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 MS4A14Q96JA4 679 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 SLC4A5Q9BY07 1137 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 CRTAC1Q9NQ79 661 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 METTL5Q9NRN9 209 aaKnown RBP13.05□□□□□ -0.32
SPIDR-209ENST00000519141 SMARCAL1Q9NZC9 954 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 EHD2Q9NZN4 543 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 DNAJB4Q9UDY4 337 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 CDH23Q9H251 3354 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 F8W810 466 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 TULP2O00295 520 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 TRAPPC3O43617 180 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 MARCKSL1P49006 195 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 NAA30Q147X3 362 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-209ENST00000519141 CCDC142Q17RM4 750 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 OVOS1Q6IE37 1185 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 OR6B2Q6IFH4 312 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 FAM183BPQ6ZVS7 135 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 CRIPAKQ8N1N5 446 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 THEM5Q8N1Q8 247 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 LRRC43Q8N309 656 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 ACTRT1Q8TDG2 376 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 ALG3Q92685 438 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 KRT35Q92764 455 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 GDF15Q99988 308 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 ACBD6Q9BR61 282 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 NRDE2Q9H7Z3 1164 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 CYLDQ9NQC7 956 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 USTQ9Y2C2 406 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 PCDHA3Q9Y5H8 950 aa13.05□□□□□ -0.32
SPIDR-209ENST00000519141 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 PIK3R2O00459 728 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 XPO1O14980 1071 aaKnown RBP13.04□□□□□ -0.32
SPIDR-209ENST00000519141 KIAA0355O15063 1070 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 TIMP1P01033 207 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 FAM200BP0CF97 657 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 NPR3P17342 541 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 ACADSBP45954 432 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 PLA2G4AP47712 749 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 PLCB3Q01970 1234 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 C2orf54Q08AI8 447 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-209ENST00000519141 CLUL1Q15846 466 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 INTS6LQ5JSJ4 861 aaKnown RBP13.04□□□□□ -0.32
SPIDR-209ENST00000519141 SEL1L2Q5TEA6 688 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 DCAF12L1Q5VU92 463 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 KIAA0319Q5VV43 1072 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 TMEM110Q86TL2 294 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 FAM35AQ86V20 835 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 ZDHHC17Q8IUH5 632 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 RASGEF1CQ8N431 466 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 SPATA4Q8NEY3 305 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 JOSD2Q8TAC2 188 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 MYCBPAPQ8TBZ2 947 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 FNIP1Q8TF40 1166 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 RNPC3Q96LT9 517 aaKnown RBP13.04□□□□□ -0.32
SPIDR-209ENST00000519141 RTP3Q9BQQ7 232 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.04□□□□□ -0.321e-9■■□□□ 11.6
SPIDR-209ENST00000519141 DUSP16Q9BY84 665 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 KRT82Q9NSB4 513 aa13.04□□□□□ -0.32
SPIDR-209ENST00000519141 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPIDR-209ENST00000519141 MYBPHLA2RUH7 354 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 CLDN5O00501 218 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 PSTPIP1O43586 416 aa13.03□□□□□ -0.32
SPIDR-209ENST00000519141 TADA2AO75478 443 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms