RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 HMGN5P82970 282 aaKnown RBP12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 ZXDBP98169 803 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 TSPY1Q01534 308 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 MESP2Q0VG99 397 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 CRY1Q16526 586 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 NFE2Q16621 373 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 TRIM61Q5EBN2 209 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 SCARA3Q6AZY7 606 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 CRELD2Q6UXH1 353 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 TMEM92Q6UXU6 159 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 GPBP1Q86WP2 473 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 SFTPA1Q8IWL2 248 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 PDCL2Q8N4E4 241 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 CCDC33Q8N5R6 958 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 FAM184AQ8NB25 1140 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 SH3RF2Q8TEC5 729 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 LEO1Q8WVC0 666 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 RLN3Q8WXF3 142 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 CDK5RAP3Q96JB5 506 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 FNBP1Q96RU3 617 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 IKZF4Q9H2S9 585 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 PARVGQ9HBI0 331 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 UXTQ9UBK9 157 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 MMP17Q9ULZ9 603 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 L1RE1Q9UN81 338 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 NEUROG3Q9Y4Z2 214 aa12.21□□□□□ -0.45
CTNNA1-205ENST00000517904 ADAMTS9Q9P2N4 1935 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 SPAARA0A1B0GVQ0 90 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 HCRTO43612 131 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 SCP2P22307 547 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 P2RY2P41231 377 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 PTGER3P43115 390 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 MAPK8P45983 427 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 RPL10AP62906 217 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 GTF2BQ00403 316 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 DHX8Q14562 1220 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 SV2CQ496J9 727 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 INTS6LQ5JSJ4 861 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 ADALQ6DHV7 355 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 ARMCX6Q7L4S7 300 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 TTC30AQ86WT1 665 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 ACBD6Q9BR61 282 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 ABCB6Q9NP58 842 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 GTF3C4Q9UKN8 822 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 MSRB2Q9Y3D2 182 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 STYXL1Q9Y6J8 313 aa12.2□□□□□ -0.46
CTNNA1-205ENST00000517904 PLXND1Q9Y4D7 1925 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 ATXN2Q99700 1313 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 TAF4O00268 1085 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 FAM13AO94988 1023 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 TCF3P15923 654 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 ENGP17813 658 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 LMAN2Q12907 356 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 NR1H3Q13133 447 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 PIP4P1Q86T03 277 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 OSTM1Q86WC4 334 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 TMEFF1Q8IYR6 380 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 ALLCQ8N6M5 410 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 CCDC26Q8TAB7 109 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 FAM84AQ96KN4 292 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 FSCN3Q9NQT6 498 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 MBD1Q9UIS9 605 aaPredicted RBP12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 AGO2Q9UKV8 859 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 ARHGAP26Q9UNA1 814 aa12.19□□□□□ -0.46
CTNNA1-205ENST00000517904 SGK1O00141 431 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 TNFRSF10BO14763 440 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 NFATC1O95644 943 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 CAPNS1P04632 268 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 CYP17A1P05093 508 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 HDCP19113 662 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 ADSSP30520 456 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 POLR2BP30876 1174 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 FAM193AP78312 1265 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 SIM1P81133 766 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 SEMA3BQ13214 749 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 KCNB1Q14721 858 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 CFAP221Q4G0U5 840 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 RILPL1Q5EBL4 403 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 LPCAT2Q7L5N7 544 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 SYT12Q8IV01 421 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 C1orf127Q8N9H9 656 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 IL17RCQ8NAC3 791 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 TXNDC5Q8NBS9 432 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 ZSWIM2Q8NEG5 633 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 ZNF560Q96MR9 790 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 NUSAP1Q9BXS6 441 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 ZHX3Q9H4I2 956 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 SLC32A1Q9H598 525 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 ZDHHC4Q9NPG8 344 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 MYOFQ9NZM1 2061 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 PCDH15Q96QU1 1955 aa12.18□□□□□ -0.46
CTNNA1-205ENST00000517904 MYO18AQ92614 2054 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 LEFTY2O00292 366 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 SCAMP3O14828 347 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms