RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TMEM199Q8N511 208 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 DTWD1Q8N5C7 304 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 METTL13Q8N6R0 699 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 RNF214Q8ND24 703 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ACRBPQ8NEB7 543 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 RDM1Q8NG50 284 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ERMNQ8TAM6 284 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 BAHD1Q8TBE0 780 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZNF507Q8TCN5 953 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TRAPPC12Q8WVT3 735 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 BADQ92934 168 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 SH3KBP1Q96B97 665 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZBTB10Q96DT7 871 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CCDC34Q96HJ3 373 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 DYDC2Q96IM9 177 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CCDC138Q96M89 665 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CCDC43Q96MW1 224 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 SLC6A18Q96N87 628 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZNF396Q96N95 335 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 MTMR9Q96QG7 549 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 PCYT2Q99447 389 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 DPH2Q9BQC3 489 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 SH2D3AQ9BRG2 576 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 LGR4Q9BXB1 951 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 RAB34Q9BZG1 259 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 FTOQ9C0B1 505 aaKnown RBP eCLIP3.02□□□□□ -1.93
SKP1-204ENST00000517691 FAM49AQ9H0Q0 323 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 EPN3Q9H201 632 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 GSX1Q9H4S2 264 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 IFT22Q9H7X7 185 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 SUGCTQ9HAC7 445 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 VPS45Q9NRW7 570 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 RAD18Q9NS91 495 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ANKEF1Q9NU02 776 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 RGL1Q9NZL6 768 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CEP72Q9P209 647 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 LRWD1Q9UFC0 647 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CDC23Q9UJX2 597 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 VAV3Q9UKW4 847 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TMCC3Q9ULS5 477 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 GIT1Q9Y2X7 761 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 PCDHGB6Q9Y5F9 930 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CLIC4Q9Y696 253 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 EMSYQ7Z589 1322 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 DNAH12Q6ZR08 3092 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 A0A087WWV3 80 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 IGKV6D-21A0A0A0MT36 114 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 TMEM150BA6NC51 233 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 VWA3AA6NCI4 1184 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 M0QZ92 97 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 LAD1O00515 517 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 TPP1O14773 563 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 KIAA0355O15063 1070 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 SUV39H1O43463 412 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 AP1G1O43747 822 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 OPA1O60313 960 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 PCDHGA12O60330 932 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 DKC1O60832 514 aaKnown RBP eCLIP3.01□□□□□ -1.93
SKP1-204ENST00000517691 SLITRK3O94933 977 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 ALX3O95076 343 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 BMP15O95972 392 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 TP53P04637 393 aaPredicted RBP3.01□□□□□ -1.93
SKP1-204ENST00000517691 CSF2RAP15509 400 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 ITGB8P26012 769 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 TMOD1P28289 359 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 MARCKSP29966 332 aaPredicted RBP3.01□□□□□ -1.93
SKP1-204ENST00000517691 CDC25AP30304 524 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 FLT3P36888 993 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 CCT6AP40227 531 aaKnown RBP3.01□□□□□ -1.93
SKP1-204ENST00000517691 MAGEA10P43363 369 aaPredicted RBP3.01□□□□□ -1.93
SKP1-204ENST00000517691 DNM2P50570 870 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 ERVK-21P61565 698 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 TSPY1Q01534 308 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 FPGSQ05932 587 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 TMEM62Q0P6H9 643 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 PKP1Q13835 747 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 MAP7Q14244 749 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 PDIA5Q14554 519 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 DUOXA2Q1HG44 320 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 XKR9Q5GH70 373 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 XKR3Q5GH77 459 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 ZNF484Q5JVG2 852 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 HP1BP3Q5SSJ5 553 aaPredicted RBP3.01□□□□□ -1.93
SKP1-204ENST00000517691 ZNF648Q5T619 568 aaPredicted RBP3.01□□□□□ -1.93
SKP1-204ENST00000517691 KRT79Q5XKE5 535 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 RETSATQ6NUM9 610 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 EFCAB12Q6NXP0 572 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 MTHFD1LQ6UB35 978 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 PRR23CQ6ZRP0 262 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 OTUD6AQ7L8S5 288 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 CHST15Q7LFX5 561 aaPredicted RBP3.01□□□□□ -1.93
SKP1-204ENST00000517691 DEFB128Q7Z7B8 93 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 RSPH3Q86UC2 560 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 SESTD1Q86VW0 696 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 CMTR2Q8IYT2 770 aaKnown RBP3.01□□□□□ -1.93
SKP1-204ENST00000517691 OTUD6BQ8N6M0 293 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 C4orf32Q8N8J7 132 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 SMG8Q8ND04 991 aaKnown RBP3.01□□□□□ -1.93
SKP1-204ENST00000517691 RASSF8Q8NHQ8 419 aa3.01□□□□□ -1.93
SKP1-204ENST00000517691 SLC35G2Q8TBE7 412 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms