RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 DLX2Q07687 328 aaPredicted RBP10.49□□□□□ -0.73
CLN8-202ENST00000517514 ADAM15Q13444 863 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 CNGA2Q16280 664 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 NFE2Q16621 373 aaPredicted RBP10.49□□□□□ -0.73
CLN8-202ENST00000517514 SGO2Q562F6 1265 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 SDHAF4Q5VUM1 108 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 LLGL2Q6P1M3 1020 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 TMEM184AQ6ZMB5 413 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 CLEC20AQ6ZU45 233 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 EFHBQ8N7U6 833 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 SYN2Q92777 582 aaPredicted RBP10.49□□□□□ -0.73
CLN8-202ENST00000517514 FUBP3Q96I24 572 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLN8-202ENST00000517514 SPAG5Q96R06 1193 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 KCNK16Q96T55 309 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 IGFLR1Q9H665 355 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 ABCB6Q9NP58 842 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 ABI2Q9NYB9 513 aaPredicted RBP10.49□□□□□ -0.73
CLN8-202ENST00000517514 CLEC1BQ9P126 229 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 TSPAN16Q9UKR8 245 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 KIAA1257Q9ULG3 409 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 LUC7L2Q9Y383 392 aaKnown RBP10.49□□□□□ -0.73
CLN8-202ENST00000517514 PCDHB5Q9Y5E4 795 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 DENND4AQ7Z401 1863 aa10.49□□□□□ -0.73
CLN8-202ENST00000517514 TNFRSF10BO14763 440 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 TBX10O75333 385 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 RFPL2O75678 378 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 MMEP08473 750 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 ARID5AQ03989 594 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 PTK2Q05397 1052 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 SMARCB1Q12824 385 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 TRIM14Q14142 442 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 BMS1Q14692 1282 aaKnown RBP10.48□□□□□ -0.73
CLN8-202ENST00000517514 MEA1Q16626 185 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 DDR2Q16832 855 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 GOLGA7BQ2TAP0 167 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 TAF3Q5VWG9 929 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 SYCE2Q6PIF2 218 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 GPRIN1Q7Z2K8 1008 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 ZNF571Q7Z3V5 609 aaPredicted RBP10.48□□□□□ -0.73
CLN8-202ENST00000517514 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.48□□□□□ -0.73
CLN8-202ENST00000517514 PPFIBP1Q86W92 1011 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 SPATA2LQ8IUW3 424 aaPredicted RBP10.48□□□□□ -0.73
CLN8-202ENST00000517514 C12orf76Q8N812 135 aaPredicted RBP10.48□□□□□ -0.73
CLN8-202ENST00000517514 ANKRD52Q8NB46 1076 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 SPC24Q8NBT2 197 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 UBA3Q8TBC4 463 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 SPPL2BQ8TCT7 592 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 C2orf15Q8WU43 125 aaKnown RBP10.48□□□□□ -0.73
CLN8-202ENST00000517514 SLC35F5Q8WV83 523 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 ZNF707Q96C28 371 aaPredicted RBP10.48□□□□□ -0.73
CLN8-202ENST00000517514 IQCDQ96DY2 449 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 GAS2L1Q99501 681 aaPredicted RBP10.48□□□□□ -0.73
CLN8-202ENST00000517514 CDCA3Q99618 268 aaPredicted RBP10.48□□□□□ -0.73
CLN8-202ENST00000517514 DUSP16Q9BY84 665 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 MAN1C1Q9NR34 630 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 KRT82Q9NSB4 513 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 ARHGAP20Q9P2F6 1191 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 HSFX1Q9UBD0 423 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 CDH22Q9UJ99 828 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 MAFFQ9ULX9 164 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 PCDHGC3Q9UN70 934 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 YIPF1Q9Y548 306 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 INSL5Q9Y5Q6 135 aa10.48□□□□□ -0.73
CLN8-202ENST00000517514 AKR1B15C9JRZ8 316 aaPredicted RBP10.47□□□□□ -0.73
CLN8-202ENST00000517514 F8VP50 259 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 DDX3XO00571 662 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLN8-202ENST00000517514 THAP12O43422 761 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 ZMYND10O75800 440 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 AP1G2O75843 785 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 C8AP07357 584 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 FERP16591 822 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 FECHP22830 423 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 CDH5P33151 784 aaPredicted RBP10.47□□□□□ -0.73
CLN8-202ENST00000517514 GPD2P43304 727 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 RPL34P49207 117 aaKnown RBP10.47□□□□□ -0.73
CLN8-202ENST00000517514 USP46P62068 366 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 CDR2Q01850 454 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 PDE4CQ08493 712 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 MTMR3Q13615 1198 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 MAPRE1Q15691 268 aaKnown RBP10.47□□□□□ -0.73
CLN8-202ENST00000517514 ASIC2Q16515 512 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 ASTE1Q2TB18 679 aaPredicted RBP10.47□□□□□ -0.73
CLN8-202ENST00000517514 SFMBT2Q5VUG0 894 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 C4orf50Q6ZRC1 276 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 TMEM139Q8IV31 216 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 SLC30A5Q8TAD4 765 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 SLC7A14Q8TBB6 771 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 GPR152Q8TDT2 470 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 HDAC7Q8WUI4 952 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 SMARCD1Q96GM5 515 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 PDLIM2Q96JY6 352 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 MSLNLQ96KJ4 702 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 CHP1Q99653 195 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 AGPAT1Q99943 283 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 MED10Q9BTT4 135 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 LRRC3Q9BY71 257 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 PLEKHA4Q9H4M7 779 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 HAUS4Q9H6D7 363 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 CYP4F11Q9HBI6 524 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 ABHD10Q9NUJ1 306 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms