RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 TMEFF2Q9UIK5 374 aaPredicted RBP8.88□□□□□ -0.99
SFXN1-211ENST00000515736 KCNG1Q9UIX4 513 aa8.88□□□□□ -0.99
SFXN1-211ENST00000515736 ZNF180Q9UJW8 692 aa8.88□□□□□ -0.99
SFXN1-211ENST00000515736 CTDP1Q9Y5B0 961 aaPredicted RBP8.88□□□□□ -0.99
SFXN1-211ENST00000515736 BACE2Q9Y5Z0 518 aa8.88□□□□□ -0.99
SFXN1-211ENST00000515736 UBIAD1Q9Y5Z9 338 aa8.88□□□□□ -0.99
SFXN1-211ENST00000515736 MYH9P35579 1960 aaKnown RBP8.88□□□□□ -0.99
SFXN1-211ENST00000515736 C2orf71A6NGG8 1288 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 K7ESF4 209 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 MAPK13O15264 365 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 MEFVO15553 781 aaPredicted RBP8.87□□□□□ -0.99
SFXN1-211ENST00000515736 PJA2O43164 708 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 RFPL1O75677 317 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 GFPT2O94808 682 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 SLITRK3O94933 977 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 SERPING1P05155 500 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 CKMP06732 381 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 CD3EP07766 207 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 PRLRP16471 622 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 NR2F2P24468 414 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 ARHGAP25P42331 645 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 SNRPNP63162 240 aaKnown RBP8.87□□□□□ -0.99
SFXN1-211ENST00000515736 IRX3P78415 501 aaPredicted RBP8.87□□□□□ -0.99
SFXN1-211ENST00000515736 ENPEPQ07075 957 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 CDK5R2Q13319 367 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 MLC1Q15049 377 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 ELF2Q15723 593 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 PTPN21Q16825 1174 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 SGO2Q562F6 1265 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 CCDC122Q5T0U0 273 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 CWF19L1Q69YN2 538 aaKnown RBP8.87□□□□□ -0.99
SFXN1-211ENST00000515736 IQSEC1Q6DN90 963 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 PDXDC1Q6P996 788 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 RSRC2Q7L4I2 434 aaKnown RBP8.87□□□□□ -0.99
SFXN1-211ENST00000515736 SFR1Q86XK3 245 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 ZC3H7AQ8IWR0 971 aaKnown RBP8.87□□□□□ -0.99
SFXN1-211ENST00000515736 ACRBPQ8NEB7 543 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 RUBCNQ92622 972 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 HPS3Q969F9 1004 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 JAKMIP2Q96AA8 810 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 HVCN1Q96D96 273 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 FAM46AQ96IP4 442 aaKnown RBP8.87□□□□□ -0.99
SFXN1-211ENST00000515736 CDHR1Q96JP9 859 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 ALS2CR12Q96Q35 445 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.87□□□□□ -0.99
SFXN1-211ENST00000515736 DEF6Q9H4E7 631 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 ST6GALNAC4Q9H4F1 302 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 MMRN2Q9H8L6 949 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 ARNT2Q9HBZ2 717 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 JADE2Q9NQC1 790 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 AIPL1Q9NZN9 384 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 TMOD4Q9NZQ9 345 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 PLXNB2O15031 1838 aa8.87□□□□□ -0.99
SFXN1-211ENST00000515736 MYH10P35580 1976 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 BTNL10A8MVZ5 291 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 RNF225M0QZC1 329 aaPredicted RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 GNB5O14775 395 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 MSCO60682 206 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 N4BP1O75113 896 aaKnown RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 COBLO75128 1261 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 TACC1O75410 805 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 EIF3JO75822 258 aaKnown RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 AFPP02771 609 aaKnown RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 HMGCRP04035 888 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 CCDC172P0C7W6 258 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 CAPN2P17655 700 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 VCAM1P19320 739 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 PSMC2P35998 433 aaKnown RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 LSSP48449 732 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 KIF11P52732 1056 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 BACE1P56817 501 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 SNAP25P60880 206 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 ITIH3Q06033 890 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 BRD3Q15059 726 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 SFMBT2Q5VUG0 894 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 PAPD7Q5XG87 772 aaKnown RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 CRTC3Q6UUV7 619 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 MIER3Q7Z3K6 550 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 C12orf56Q8IXR9 622 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 C4orf19Q8IY42 314 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 CBARPQ8N350 705 aaPredicted RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 MSL3Q8N5Y2 521 aaKnown RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 DIS3LQ8TF46 1054 aaKnown RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 CLEC4DQ8WXI8 215 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 CHP1Q99653 195 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 SENP7Q9BQF6 1050 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 DUSP23Q9BVJ7 150 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 CARD6Q9BX69 1037 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 RHOBTB2Q9BYZ6 727 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 ASCC2Q9H1I8 757 aaPredicted RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 TMEM206Q9H813 350 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 C17orf75Q9HAS0 396 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 PAK6Q9NQU5 681 aaPredicted RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 C1GALT1Q9NS00 363 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 ANKEF1Q9NU02 776 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 AGPAT5Q9NUQ2 364 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 OGFRQ9NZT2 677 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 LARSQ9P2J5 1176 aaKnown RBP8.86□□□□□ -0.99
SFXN1-211ENST00000515736 ADAMTS5Q9UNA0 930 aa8.86□□□□□ -0.99
SFXN1-211ENST00000515736 COQ6Q9Y2Z9 468 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms