RNA–Protein interactions for RNA: ENST00000515339.5

PACRGL-233, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-233ENST00000515339 PLCB2Q00722 1185 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 MAPRE1Q15691 268 aaKnown RBP23.58■■□□□ 1.37
PACRGL-233ENST00000515339 ZNF528Q3MIS6 628 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 TXNDC11Q6PKC3 985 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 SLC9A9Q8IVB4 645 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 MYCBPAPQ8TBZ2 947 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 PCED1BQ96HM7 432 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 SEMA4AQ9H3S1 761 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 DPEP3Q9H4B8 488 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 TRPC7Q9HCX4 862 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 TDP1Q9NUW8 608 aa23.58■■□□□ 1.37
PACRGL-233ENST00000515339 THG1LQ9NWX6 298 aaKnown RBP23.58■■□□□ 1.37
PACRGL-233ENST00000515339 STAU1O95793 577 aaKnown RBP23.57■■□□□ 1.36
PACRGL-233ENST00000515339 CHRNB1P11230 501 aa23.57■■□□□ 1.36
PACRGL-233ENST00000515339 ATICP31939 592 aa23.57■■□□□ 1.36
PACRGL-233ENST00000515339 CTHP32929 405 aa23.57■■□□□ 1.36
PACRGL-233ENST00000515339 GRIK1P39086 918 aa23.57■■□□□ 1.36
PACRGL-233ENST00000515339 DLG4P78352 724 aa23.57■■□□□ 1.36
PACRGL-233ENST00000515339 WDR44Q5JSH3 913 aa23.57■■□□□ 1.36
PACRGL-233ENST00000515339 VSTM1Q6UX27 236 aa23.57■■□□□ 1.36
PACRGL-233ENST00000515339 RIN3Q8TB24 985 aa23.57■■□□□ 1.36
PACRGL-233ENST00000515339 SYAP1Q96A49 352 aaPredicted RBP23.57■■□□□ 1.36
PACRGL-233ENST00000515339 PRMT8Q9NR22 394 aaPredicted RBP23.57■■□□□ 1.36
PACRGL-233ENST00000515339 GKN1Q9NS71 199 aa23.57■■□□□ 1.36
PACRGL-233ENST00000515339 RBM12Q9NTZ6 932 aaKnown RBP23.57■■□□□ 1.36
PACRGL-233ENST00000515339 EP300Q09472 2414 aaPredicted RBP23.57■■□□□ 1.36
PACRGL-233ENST00000515339 A0A1W2PQ27 194 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 A0A1W2PQ64 194 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 A0A1W2PQD8 194 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 CLDN10P78369 228 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 DPYDQ12882 1025 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 KRBA2Q6ZNG9 492 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 RALGPS2Q86X27 583 aaPredicted RBP23.56■■□□□ 1.36
PACRGL-233ENST00000515339 MSANTD3Q96H12 275 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 SLC22A12Q96S37 553 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 CYP2S1Q96SQ9 504 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 SMYD3Q9H7B4 428 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 SPTBN4Q9H254 2564 aa23.56■■□□□ 1.36
PACRGL-233ENST00000515339 SOBPA7XYQ1 873 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 A8MXQ7 604 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 RHOBTB3O94955 611 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 VNN1O95497 513 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 C4BPAP04003 597 aaKnown RBP23.55■■□□□ 1.36
PACRGL-233ENST00000515339 PTPN1P18031 435 aaKnown RBP23.55■■□□□ 1.36
PACRGL-233ENST00000515339 RAP1GAPP47736 663 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 USP46P62068 366 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 NCOA4Q13772 614 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 PON2Q15165 354 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 ZNF699Q32M78 642 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 ITPRIPL2Q3MIP1 535 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 CEP135Q66GS9 1140 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 TRIM68Q6AZZ1 485 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 C1orf228Q6PIY5 440 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 SCARA5Q6ZMJ2 495 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 TTC16Q8NEE8 873 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 TMEM174Q8WUU8 243 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 CCDC47Q96A33 483 aaKnown RBP23.55■■□□□ 1.36
PACRGL-233ENST00000515339 SPATA17Q96L03 361 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 FAM83CQ9BQN1 747 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 KIF9Q9HAQ2 790 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 MAPK8IP1Q9UQF2 711 aa23.55■■□□□ 1.36
PACRGL-233ENST00000515339 ANXA13P27216 316 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 AP3M2P53677 418 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 CACNA2D1P54289 1103 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 CDH8P55286 799 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 GAS6Q14393 721 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 ZNF518BQ9C0D4 1074 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 EBF3Q9H4W6 596 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 VRTNQ9H8Y1 702 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 HPS4Q9NQG7 708 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 TMEM30AQ9NV96 361 aa23.54■■□□□ 1.36
PACRGL-233ENST00000515339 HELZP42694 1942 aaKnown RBP23.54■■□□□ 1.36
PACRGL-233ENST00000515339 TRAV19A0A0A6YYK7 116 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 C2orf78A6NCI8 922 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 F8VP50 259 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 CLDN5O00501 218 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 CALUO43852 315 aaPredicted RBP23.53■■□□□ 1.36
PACRGL-233ENST00000515339 KINO60870 393 aaKnown RBP23.53■■□□□ 1.36
PACRGL-233ENST00000515339 ZNF202O95125 648 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 CKMP06732 381 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 FAM163BP0C2L3 166 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 LRRC32Q14392 662 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 ZNF268Q14587 947 aaPredicted RBP23.53■■□□□ 1.36
PACRGL-233ENST00000515339 ZNF667Q5HYK9 610 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 Q6ZS52 159 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 DENND5BQ6ZUT9 1274 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 B3GALNT2Q8NCR0 500 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 IER2Q9BTL4 223 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 ZSCAN32Q9NX65 697 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 TRAF3IP3Q9Y228 551 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 PCDHGA2Q9Y5H1 932 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 OTOGLQ3ZCN5 2332 aa23.53■■□□□ 1.36
PACRGL-233ENST00000515339 OTOL1A6NHN0 477 aaPredicted RBP23.52■■□□□ 1.36
PACRGL-233ENST00000515339 TRIM66O15016 1216 aa23.52■■□□□ 1.36
PACRGL-233ENST00000515339 USP17L7P0C7H9 530 aa23.52■■□□□ 1.36
PACRGL-233ENST00000515339 ARSAP15289 507 aa23.52■■□□□ 1.36
PACRGL-233ENST00000515339 SATB1Q01826 763 aa23.52■■□□□ 1.36
PACRGL-233ENST00000515339 CC2D1AQ6P1N0 951 aaPredicted RBP23.52■■□□□ 1.36
PACRGL-233ENST00000515339 ARL14EPQ8N8R7 260 aaPredicted RBP23.52■■□□□ 1.36
PACRGL-233ENST00000515339 SUMF1Q8NBK3 374 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms