RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RNF19BQ6ZMZ0 732 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 ZNF571Q7Z3V5 609 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 VPS36Q86VN1 386 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 TMTC1Q8IUR5 882 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 TMEM139Q8IV31 216 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 CCDC112Q8NEF3 446 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 SLC30A5Q8TAD4 765 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 SLC2A14Q8TDB8 520 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 SLC22A17Q8WUG5 538 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 PPP2R3CQ969Q6 453 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 C8orf48Q96LL4 319 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 AGPAT1Q99943 283 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 FAM49BQ9NUQ9 324 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 FBXW11Q9UKB1 542 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 TSPAN16Q9UKR8 245 aa12.69□□□□□ -0.38
PDLIM5-220ENST00000514830 CLASP2O75122 1294 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 MICAL2O94851 1124 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 POU2F2P09086 479 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 HAPLN1P10915 354 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 CCDC130P13994 396 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 NPR3P17342 541 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 COL9A1P20849 921 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 GPD2P43304 727 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 PLA2G4AP47712 749 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 TUFMP49411 452 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 GOLGA8FQ08AF8 430 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 GOLGA8DPQ0D2H9 430 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 KCNC3Q14003 757 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 DUSP6Q16828 381 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 CCDC142Q17RM4 750 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 TTC30AQ86WT1 665 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 LRRC8AQ8IWT6 810 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 CCDC170Q8IYT3 715 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 MICAL1Q8TDZ2 1067 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 SLC20A1Q8WUM9 679 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 SLC35F5Q8WV83 523 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 SPATA17Q96L03 361 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 LPIN3Q9BQK8 851 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 PLEKHA4Q9H4M7 779 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 NSUN3Q9H649 340 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 HESX1Q9UBX0 185 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 DPP7Q9UHL4 492 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 NENFQ9UMX5 172 aa12.68□□□□□ -0.38
PDLIM5-220ENST00000514830 DENND4CQ5VZ89 1909 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 XPO1O14980 1071 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 TRIM66O15016 1216 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 TGM5O43548 720 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 LCA5LO95447 670 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 GLUD1P00367 558 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 MMEP08473 750 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 FAM200BP0CF97 657 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 SKILP12757 684 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 UNGP13051 313 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 KLRC2P26717 231 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 HOXA9P31269 272 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 SLC8A3P57103 927 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 NOMO3P69849 1222 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 MRPS5P82675 430 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 CYP27A1Q02318 531 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 CENPCQ03188 943 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 ADCY1Q08828 1119 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 GRIN2CQ14957 1233 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 COL19A1Q14993 1142 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 GOLGA7BQ2TAP0 167 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 TDRD12Q587J7 1177 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 ELMSAN1Q6PJG2 1045 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 TMEM184AQ6ZMB5 413 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 CLEC20AQ6ZU45 233 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 CCDC149Q6ZUS6 474 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 SCML4Q8N228 414 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 ATAD1Q8NBU5 361 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 TMEM35BQ8NCS4 154 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 KCTD13Q8WZ19 329 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 HSFY1Q96LI6 401 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 CHP1Q99653 195 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 SMOQ99835 787 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 BAG1Q99933 345 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 NHEJ1Q9H9Q4 299 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 DMAP1Q9NPF5 467 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 KRT82Q9NSB4 513 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 COMMD8Q9NX08 183 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 THEGQ9P2T0 379 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 CEP83Q9Y592 693 aa12.67□□□□□ -0.38
PDLIM5-220ENST00000514830 MYO16Q9Y6X6 1858 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 M0QYV0 167 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 RFXAPO00287 272 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 CLDN5O00501 218 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 DDX3XO00571 662 aaKnown RBP eCLIP12.66□□□□□ -0.388e-10■■■□□ 15.6
PDLIM5-220ENST00000514830 AP1G2O75843 785 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 CALCAP01258 141 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 PLEKP08567 350 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 CFHP08603 1231 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 TNFAIP3P21580 790 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 BDNFP23560 247 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 CYP2F1P24903 491 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 ADORA2BP29275 332 aa12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 EIF4A3P38919 411 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-220ENST00000514830 ARPP19P56211 112 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms