RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PDHA1P08559 390 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 CPT1AP50416 773 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 ITGA8P53708 1063 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 BTKQ06187 659 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 PLAG1Q6DJT9 500 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 KCNV1Q6PIU1 500 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 TSHZ1Q6ZSZ6 1077 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 TXLNBQ8N3L3 684 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 C18orf8Q96DM3 657 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 CRB3Q9BUF7 120 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 WDR12Q9GZL7 423 aaKnown RBP6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 SERHL2Q9H4I8 314 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 MMRN2Q9H8L6 949 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 TRMT13Q9NUP7 481 aaKnown RBP6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 ZSCAN32Q9NX65 697 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 DKK4Q9UBT3 224 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 SERTAD3Q9UJW9 196 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 CAPN11Q9UMQ6 739 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 MAN2B2Q9Y2E5 1009 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 PIPSLA2A3N6 862 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 MATN3O15232 486 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 TPD52L2O43399 206 aaKnown RBP6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 NDST3O95803 873 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 ERBB2P04626 1255 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 SRGNP10124 158 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 ITGAMP11215 1152 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 EEF1GP26641 437 aaKnown RBP6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 MAPK10P53779 464 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 STK3Q13188 491 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 KCNAB1Q14722 419 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 INSCQ1MX18 579 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 CACHD1Q5VU97 1274 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 BEND5Q7L4P6 421 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 LNX2Q8N448 690 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 FANCBQ8NB91 859 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 MYCBPAPQ8TBZ2 947 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 PPP2R3CQ969Q6 453 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 FAM136AQ96C01 138 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 PTCD3Q96EY7 689 aaKnown RBP6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 ACTRT3Q9BYD9 372 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 ARFGAP3Q9NP61 516 aa6.18□□□□□ -1.42
HMGCS1-207ENST00000514610 PPM1DO15297 605 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 NARSO43776 548 aaKnown RBP6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 RASAL1O95294 804 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 RHOP08100 348 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 GABRB3P28472 473 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 ADORA2AP29274 412 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 ZEB1P37275 1124 aaPredicted RBP6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 CHAF1AQ13111 956 aaPredicted RBP6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 ZNF750Q32MQ0 723 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 LY6G5CQ5SRR4 150 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 FAM83BQ5T0W9 1011 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 ICE2Q659A1 982 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 VWA1Q6PCB0 445 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 KRT28Q7Z3Y7 464 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 DNAJB14Q8TBM8 379 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 TMEM171Q8WVE6 324 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 POF1BQ8WVV4 589 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 IPCEF1Q8WWN9 437 aaPredicted RBP6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 ZNF566Q969W8 418 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 Q96MF0 132 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 NELL2Q99435 816 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 TTLL2Q9BWV7 592 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 TPSD1Q9BZJ3 242 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 GBA2Q9HCG7 927 aaPredicted RBP6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 PTPRHQ9HD43 1115 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 TBCCD1Q9NVR7 557 aa6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 TESQ9UGI8 421 aaKnown RBP6.17□□□□□ -1.42
HMGCS1-207ENST00000514610 A0A087WV62 115 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 FAM234BA2RU67 622 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 VWC2LB2RUY7 222 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 NPIPB8E9PQR5 432 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 F5H423 210 aaPredicted RBP6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 PROM1O43490 865 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 PLA2G6O60733 806 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 SRGAP2O75044 1071 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 PPFIA4O75335 1185 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 PIAS2O75928 621 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 MYL4P12829 197 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 INSRRP14616 1297 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 TPH1P17752 444 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 TRAPPC10P48553 1259 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 PRKAG1P54619 331 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 SATB1Q01826 763 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 E2F2Q14209 437 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 TUBB8Q3ZCM7 444 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 SFRP4Q6FHJ7 346 aaPredicted RBP6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 SLC15A3Q8IY34 581 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 GLIS1Q8NBF1 620 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 B3GALNT2Q8NCR0 500 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 ATG4AQ8WYN0 398 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 ZNF341Q9BYN7 854 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 STK33Q9BYT3 514 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 HEYLQ9NQ87 328 aaPredicted RBP6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 KCTD5Q9NXV2 234 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 SNX14Q9Y5W7 946 aa6.16□□□□□ -1.42
HMGCS1-207ENST00000514610 CD3EAPO15446 510 aaKnown RBP6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 KCNQ3O43525 872 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 INMTO95050 263 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 TECP42680 631 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms