RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 CXCL8P10145 99 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 PSMA2P25787 234 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 STX2P32856 288 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 ASPAP45381 313 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 CLCN3P51790 818 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 GRM1Q13255 1194 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 ITIH4Q14624 930 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 TFDP3Q5H9I0 405 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 KCNT1Q5JUK3 1230 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 ATF7IP2Q5U623 682 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 DENND1BQ6P3S1 775 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 WDTC1Q8N5D0 677 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 MRRFQ96E11 262 aaKnown RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 CCDC97Q96F63 343 aaPredicted RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 NAF1Q96HR8 494 aaKnown RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 SPATA33Q96N06 139 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 GPR20Q99678 358 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 MAF1Q9H063 256 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 SYNCQ9H7C4 482 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 ELP3Q9H9T3 547 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 hCG_1818297A0A087WSY0 165 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 TCRBV5S1A1TA0A578 114 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 EIF4E1BA6NMX2 242 aaKnown RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 RASA4BC9J798 803 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 POC1B-GALNT4F8VUJ3 575 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 GOLGA8MH3BSY2 632 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 RASA4O43374 803 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 TGFB3P10600 412 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 ATP2A2P16615 1042 aaKnown RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 TUBP50607 506 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 MPP2Q14168 576 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 PIGHQ14442 188 aaPredicted RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 STAT4Q14765 748 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 FASTKD3Q14CZ7 662 aaKnown RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 TAF11Q15544 211 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 ACBD5Q5T8D3 534 aaPredicted RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 TRIM42Q8IWZ5 723 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 TAB3Q8N5C8 712 aaPredicted RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 ALLCQ8N6M5 410 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 COPS5Q92905 334 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 TGS1Q96RS0 853 aaKnown RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 SLX1AQ9BQ83 275 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 C10orf88Q9H8K7 445 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 VPS37BQ9H9H4 285 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 TMEM165Q9HC07 324 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 DNAAF2Q9NVR5 837 aaKnown RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 NKIRAS1Q9NYS0 192 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 SAE1Q9UBE0 346 aaPredicted RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 ADM5C9JUS6 153 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 CDH8P55286 799 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 IGBP1P78318 339 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 MRPS35P82673 323 aaKnown RBP13.18□□□□□ -0.3
SDHA-216ENST00000514027 MYBPC3Q14896 1274 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 SURF1Q15526 300 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 PTPN20Q4JDL3 420 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 TRPM8Q7Z2W7 1104 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 ZBED8Q8IZ13 594 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 CFAP57Q96MR6 1250 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 UBE2OQ9C0C9 1292 aaKnown RBP13.18□□□□□ -0.3
SDHA-216ENST00000514027 ZNF518BQ9C0D4 1074 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 ABCF3Q9NUQ8 709 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 PCMTD2Q9NV79 361 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 DDX56Q9NY93 547 aaKnown RBP13.18□□□□□ -0.3
SDHA-216ENST00000514027 A0A0G2JMZ2 1700 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 LRRC37A2A6NM11 1700 aa13.18□□□□□ -0.3
SDHA-216ENST00000514027 SNX3O60493 162 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 CSDE1O75534 798 aaKnown RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 KRT3P12035 628 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 EIF4BP23588 611 aaKnown RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 RFC1P35251 1148 aaPredicted RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 CDKN2BP42772 138 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 VCPP55072 806 aaKnown RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 PSMC1P62191 440 aaKnown RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 TAP1Q03518 808 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 DYNC1I2Q13409 638 aaKnown RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 LBRQ14739 615 aaKnown RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 DBN1Q16643 649 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 WDR72Q3MJ13 1102 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 CELF3Q5SZQ8 465 aaKnown RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 LRRC38Q5VT99 294 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 DPH6Q7L8W6 267 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 EMC1Q8N766 993 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 JOSD2Q8TAC2 188 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 ADAM33Q9BZ11 813 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 METTL5Q9NRN9 209 aaKnown RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 LGALS13Q9UHV8 139 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 HGSO14964 777 aaPredicted RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 CREB3O43889 395 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 GAS2O43903 313 aaKnown RBP13.17□□□□□ -0.3
SDHA-216ENST00000514027 SPAG7O75391 227 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 BANF1O75531 89 aa13.17□□□□□ -0.3
SDHA-216ENST00000514027 TCEA3O75764 348 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms