RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TMEM110Q86TL2 294 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 GRK7Q8WTQ7 553 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 ATG4AQ8WYN0 398 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 FMO2Q99518 471 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 FAM129AQ9BZQ8 928 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 DNAI2Q9GZS0 605 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 SNX25Q9H3E2 840 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 KLHL11Q9NVR0 708 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 R3HDM2Q9Y2K5 976 aaKnown RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 FAN1Q9Y2M0 1017 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 GIT1Q9Y2X7 761 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 SNX24Q9Y343 169 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 HUS1O60921 280 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 RNF40O75150 1001 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 CAPN15O75808 1086 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 KRT7P08729 469 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 FLT3P36888 993 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 MLH1P40692 756 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 ZNF143P52747 638 aaPredicted RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 FAM193AP78312 1265 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 ITGA7Q13683 1181 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 TERF2Q15554 542 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 HADHQ16836 314 aaKnown RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 TRIM71Q2Q1W2 868 aaKnown RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 OR6B2Q6IFH4 312 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 ADGRF2Q8IZF7 708 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 PXYLP1Q8TE99 480 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 RIN2Q8WYP3 895 aaPredicted RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 ZBTB9Q96C00 473 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 RUFY1Q96T51 708 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 FEZ2Q9UHY8 353 aaPredicted RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 PTPN22Q9Y2R2 807 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 hCG_1818297A0A087WSY0 165 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 C2CD4BA6NLJ0 364 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 PI4K2BG5E9Z4 385 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 TULP2O00295 520 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 HCRTO43612 131 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 OPA1O60313 960 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 ZNF623O75123 536 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 TRPA1O75762 1119 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 TJP3O95049 919 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 GNRH1P01148 92 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 LMO2P25791 158 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 IL1R2P27930 398 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 RAB27AP51159 221 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 BCAT1P54687 386 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 SNX16P57768 344 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 KRT17Q04695 432 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 PDE4CQ08493 712 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 BST2Q10589 180 aaKnown RBP15.72■□□□□ 0.11
VCAN-211ENST00000513984 SNX1Q13596 522 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 MTMR3Q13615 1198 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 DSC3Q14574 896 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 TFDP3Q5H9I0 405 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 FAM26DQ5JW98 314 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 SPDYCQ5MJ68 293 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 ZFYVE27Q5T4F4 411 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 ZNF618Q5T7W0 954 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 OLFML1Q6UWY5 402 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 ANKRD52Q8NB46 1076 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 ATL2Q8NHH9 583 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 RAPGEF5Q92565 580 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 PIWIL1Q96J94 861 aaKnown RBP15.72■□□□□ 0.11
VCAN-211ENST00000513984 GAD1Q99259 594 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 TXLNGYQ9BZA5 131 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 OSBPL7Q9BZF2 842 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 TSPYL2Q9H2G4 693 aaPredicted RBP15.72■□□□□ 0.11
VCAN-211ENST00000513984 CYLDQ9NQC7 956 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 ASNSD1Q9NWL6 643 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 VPS18Q9P253 973 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 PADI3Q9ULW8 664 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 EFR3BQ9Y2G0 817 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 HTTP42858 3142 aa15.72■□□□□ 0.11
VCAN-211ENST00000513984 C3orf70A6NLC5 250 aaPredicted RBP15.71■□□□□ 0.11
VCAN-211ENST00000513984 PPFIA2O75334 1257 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 RNF8O76064 485 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 THP07101 528 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 PDGFRBP09619 1106 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 GPD1P21695 349 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 CD52P31358 61 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 PCK1P35558 622 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 HSD17B3P37058 310 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 CDKN2BP42772 138 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 RPL34P49207 117 aaKnown RBP15.71■□□□□ 0.11
VCAN-211ENST00000513984 RGS7P49802 495 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 ACLYP53396 1101 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 PTK6Q13882 451 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 PPP1R7Q15435 360 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 UAP1Q16222 522 aaPredicted RBP15.71■□□□□ 0.11
VCAN-211ENST00000513984 TRNP1Q6NT89 227 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 DRICH1Q6PGQ1 229 aaPredicted RBP15.71■□□□□ 0.11
VCAN-211ENST00000513984 AGMOQ6ZNB7 445 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 ZDHHC17Q8IUH5 632 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 FBXO25Q8TCJ0 367 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 TNIP3Q96KP6 325 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 CNPY3Q9BT09 278 aa15.71■□□□□ 0.11
VCAN-211ENST00000513984 LRRD1A4D1F6 860 aa15.71■□□□□ 0.1
VCAN-211ENST00000513984 ARL5CA6NH57 179 aa15.71■□□□□ 0.1
VCAN-211ENST00000513984 DPYSL4O14531 572 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms