RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 JADE1Q6IE81 842 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 KCNK18Q7Z418 384 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 TTC16Q8NEE8 873 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 ERMNQ8TAM6 284 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 CEP76Q8TAP6 659 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 WHAMMQ8TF30 809 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 MYRFLQ96LU7 910 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 PI4K2AQ9BTU6 479 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 POLMQ9NP87 494 aaPredicted RBP12.08□□□□□ -0.48
RNF4-218ENST00000513284 HCN2Q9UL51 889 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 SHROOM3Q8TF72 1996 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 A0A087WV48 116 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 EIF4E1BA6NMX2 242 aaKnown RBP12.07□□□□□ -0.48
RNF4-218ENST00000513284 CYB561D2O14569 222 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 NOL4O94818 638 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 OR52Z1P0C646 297 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 USP17L7P0C7H9 530 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 CSH1P0DML2 217 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 CSH2P0DML3 217 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 TCF3P15923 654 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 FOSBP53539 338 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 ANAPC15P60006 121 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 ZNF33AQ06730 810 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 SMARCB1Q12824 385 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 NR1H3Q13133 447 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 SLC14A1Q13336 389 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 SCARA3Q6AZY7 606 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 TOGARAM2Q6ZUX3 1019 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 TMPRSS7Q7RTY8 843 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 GLRX5Q86SX6 157 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 C12orf40Q86WS4 652 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 NECAB1Q8N987 351 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 CCDC26Q8TAB7 109 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 HMGB4Q8WW32 186 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 SPIRE2Q8WWL2 714 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 SPACA7Q96KW9 195 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 TMEM206Q9H813 350 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 TRPC7Q9HCX4 862 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 TOR4AQ9NXH8 423 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 ANAPC1Q9H1A4 1944 aa12.07□□□□□ -0.48
RNF4-218ENST00000513284 MYO18AQ92614 2054 aaKnown RBP12.06□□□□□ -0.48
RNF4-218ENST00000513284 TRABD2BA6NFA1 517 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 PRPF40AO75400 957 aaKnown RBP12.06□□□□□ -0.48
RNF4-218ENST00000513284 CYP17A1P05093 508 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 CKMP06732 381 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 NFICP08651 508 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 PLA2G2AP14555 144 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 PAX3P23760 479 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 CYP2F1P24903 491 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 DPP6P42658 865 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
RNF4-218ENST00000513284 RPL6Q02878 288 aaKnown RBP12.06□□□□□ -0.48
RNF4-218ENST00000513284 PPP2R3AQ06190 1150 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 CYP4F3Q08477 520 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 CAMK2BQ13554 666 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 TRIM29Q14134 588 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 IL17AQ16552 155 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 CCDC142Q17RM4 750 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 NAXDQ8IW45 347 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 PHTF2Q8N3S3 785 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 TRMT2BQ96GJ1 504 aaKnown RBP12.06□□□□□ -0.48
RNF4-218ENST00000513284 C17orf75Q9HAS0 396 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 KIAA1522Q9P206 1035 aaPredicted RBP12.06□□□□□ -0.48
RNF4-218ENST00000513284 PCDHB5Q9Y5E4 795 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 NAV2Q8IVL1 2488 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 MYOFQ9NZM1 2061 aa12.06□□□□□ -0.48
RNF4-218ENST00000513284 TRAV19A0A0A6YYK7 116 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 TCRBV21S2A2A0A5A6 115 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 PP2D1A8MPX8 630 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 DKK1O94907 266 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 KAT7O95251 611 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 PLS3P13797 630 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 GABRG2P18507 467 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 HDCP19113 662 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 CDC25AP30304 524 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 RAD51AP2Q09MP3 1159 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 STRN3Q13033 797 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 DHCR24Q15392 516 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 LARP1BQ659C4 914 aaKnown RBP12.05□□□□□ -0.48
RNF4-218ENST00000513284 RHBDF2Q6PJF5 856 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 THEM5Q8N1Q8 247 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 SLC39A7Q92504 469 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 DRC1Q96MC2 740 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 TSPAN18Q96SJ8 248 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 PNKPQ96T60 521 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 PKMYT1Q99640 499 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 PYM1Q9BRP8 204 aaKnown RBP12.05□□□□□ -0.48
RNF4-218ENST00000513284 MMTAG2Q9BU76 263 aaKnown RBP12.05□□□□□ -0.48
RNF4-218ENST00000513284 CCSER1Q9C0I3 900 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 RNF38Q9H0F5 515 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 RPF1Q9H9Y2 349 aaKnown RBP12.05□□□□□ -0.48
RNF4-218ENST00000513284 CD248Q9HCU0 757 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 BCCIPQ9P287 314 aaKnown RBP eCLIP12.05□□□□□ -0.48
RNF4-218ENST00000513284 LRWD1Q9UFC0 647 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 CPSF3Q9UKF6 684 aaKnown RBP12.05□□□□□ -0.48
RNF4-218ENST00000513284 PCOLCE2Q9UKZ9 415 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 DSEQ9UL01 958 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 ARHGAP26Q9UNA1 814 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 DNM3Q9UQ16 869 aa12.05□□□□□ -0.48
RNF4-218ENST00000513284 PCDHB9Q9Y5E1 797 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms