RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CCDC170Q8IYT3 715 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 GPD1LQ8N335 351 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 PRPF31Q8WWY3 499 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 BAP1Q92560 729 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 IRF7Q92985 503 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 EEF2KMTQ96G04 330 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 CBWD1Q9BRT8 395 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 ZFP14Q9HCL3 533 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 ADAM28Q9UKQ2 775 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 IPPQ9Y573 584 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 ATP8B3O60423 1300 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 A0A0B4J269 797 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 SSU72P8A0A1W2PR75 194 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 ACKR2O00590 384 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 ZSCAN12O43309 604 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 TOM1L1O75674 476 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 RPP40O75818 363 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 NOL4O94818 638 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 FCARP24071 287 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 HOXA11P31270 313 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 RAP1GAPP47736 663 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 SOX9P48436 509 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 FMO5P49326 533 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 VAMP7P51809 220 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 ADKP55263 362 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 CETN1Q12798 172 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 SNRNP35Q16560 246 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 MAPK6Q16659 721 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 KYAT1Q16773 422 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 COL28A1Q2UY09 1125 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 WDR44Q5JSH3 913 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 PLA2G2CQ5R387 149 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 DAB2IPQ5VWQ8 1189 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 E4F1Q66K89 784 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 GBP6Q6ZN66 633 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 CCAR2Q8N163 923 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 NEK11Q8NG66 645 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 PARD3BQ8TEW8 1205 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 LOXL4Q96JB6 756 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 FAM81BQ96LP2 452 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 EIF2AQ9BY44 585 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 MRPL4Q9BYD3 311 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 GANQ9H2C0 597 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 MINDY3Q9H8M7 445 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 IFT122Q9HBG6 1241 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 PTPRHQ9HD43 1115 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 AIPL1Q9NZN9 384 aa11.23□□□□□ -0.61
PDLIM5-217ENST00000512274 LRRIQ4A6NIV6 560 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 EIF4E1BA6NMX2 242 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 ANKRD63C9JTQ0 380 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 RNF225M0QZC1 329 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 ABLIM1O14639 778 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 SRGAP2CP0DJJ0 459 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 PON1P27169 355 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 HOXA9P31269 272 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 LIG4P49917 911 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 CYP2J2P51589 502 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 AP3M2P53677 418 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 MCL1Q07820 350 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 LRRC32Q14392 662 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 PSMD6Q15008 389 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 FAM78AQ5JUQ0 283 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 C1orf220Q5T0J3 134 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 FAM171A1Q5VUB5 890 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 VITQ6UXI7 678 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 SRGAP1Q7Z6B7 1085 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 GPR65Q8IYL9 337 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 TTC8Q8TAM2 541 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 LNX1Q8TBB1 728 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 GAB3Q8WWW8 586 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 TCEAL4Q96EI5 215 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 BBC3Q96PG8 261 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 PAAF1Q9BRP4 392 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 KIFC3Q9BVG8 833 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 RRAGDQ9NQL2 400 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 VPS45Q9NRW7 570 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 PRMT7Q9NVM4 692 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 ZNHIT6Q9NWK9 470 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 GDE1Q9NZC3 331 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 KLK13Q9UKR3 277 aa11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 KIF26AQ9ULI4 1882 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 BZW2Q9Y6E2 419 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-217ENST00000512274 VWA8A3KMH1 1905 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 ZNF233A6NK53 670 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 PES1O00541 588 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 ZNF263O14978 683 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 FAM189A1O60320 539 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 GFPT2O94808 682 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 LCA5LO95447 670 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 CEACAM1P13688 526 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 UCHL3P15374 230 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 PSMC3P17980 439 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 OR1D2P34982 312 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 VIPR2P41587 438 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 PRKCIP41743 596 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 KPNA1P52294 538 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 MBTD1Q05BQ5 628 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms