RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 MGAT3Q09327 533 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MRPL58Q14197 206 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 POLD3Q15054 466 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC14A2Q15849 920 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC38Q502W7 563 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PPP6R3Q5H9R7 873 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PPP1R26Q5T8A7 1209 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC23Q5W5X9 447 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ANO1Q5XXA6 986 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 C1orf228Q6PIY5 440 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CHSY3Q70JA7 882 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAATS1Q7Z4T9 603 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TSPYL5Q86VY4 417 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NUTM2AQ8IVF1 878 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC13Q8IYE1 715 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 HACE1Q8IYU2 909 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TNS4Q8IZW8 715 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 AFAP1L2Q8N4X5 818 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CEP120Q8N960 986 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF397Q8NF99 534 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SYMPKQ92797 1274 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ART4Q93070 314 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PHKBQ93100 1093 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RILPL2Q969X0 211 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TBC1D31Q96DN5 1066 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CDC42EP4Q9H3Q1 356 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZSWIM4Q9H7M6 989 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 HEXA-AS1Q9H8Q6 139 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ATP6V0A4Q9HBG4 840 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 C9orf78Q9NZ63 289 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DUX4Q9UBX2 424 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NTNG1Q9Y2I2 539 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CORINQ9Y5Q5 1042 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 IPO5O00410 1097 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SRGAP3O43295 1099 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MSCO60682 206 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DNAJC6O75061 913 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DDNO94850 711 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FGFR1OPO95684 399 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GNA14O95837 355 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CALM1P0DP23 149 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CALM2P0DP24 149 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CALM3P0DP25 149 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TAL1P17542 331 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ITGB5P18084 799 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ADORA2AP29274 412 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NPY2RP49146 381 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TSPY1Q01534 308 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 OCA2Q04671 838 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZBTB17Q13105 803 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 G3BP1Q13283 466 aaKnown RBP eCLIP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTTNQ14247 550 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 KIF22Q14807 665 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TESK1Q15569 626 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PTGISQ16647 500 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMEM259Q4ZIN3 620 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 IRAK1BP1Q5VVH5 260 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FBXW10Q5XX13 1052 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRILQ7L0X0 811 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARMC9Q7Z3E5 817 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLF2Q8IX21 1173 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTAGE3PQ8IX95 158 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CACNA2D3Q8IZS8 1091 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 KRT222Q8N1A0 295 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC35B2Q8TB61 432 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 BICD2Q8TD16 824 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SYN2Q92777 582 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM63Q969Q1 353 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DACT3Q96B18 629 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 AGAP3Q96P47 875 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPAG5Q96R06 1193 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 EIF2AQ9BY44 585 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAGEB5Q9BZ81 275 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CNNM2Q9H8M5 875 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC38A10Q9HBR0 1119 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 AGO4Q9HCK5 861 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 OLAHQ9NV23 265 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 AGTPBP1Q9UPW5 1226 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ABCA2Q9BZC7 2435 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FN1P02751 2386 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TEP1Q99973 2627 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRSS51A0A1B0GVH4 220 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM95CA0A1B0GW59 222 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 C7orf72A4D263 438 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 VGLL3A8MV65 326 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PLOD2O00469 737 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF197O14709 1029 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PHOX2AO14813 284 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 SYNCRIPO60506 623 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PPFIA4O75335 1185 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RFPL1O75677 317 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GABRB1P18505 474 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ICAM3P32942 547 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 LSP1P33241 339 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PPARGP37231 505 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GGCXP38435 758 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 MTIF2P46199 727 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NRLP54845 237 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ADKP55263 362 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms