RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 DUX4L3P0CJ86 424 aa11□□□□□ -0.65
NEK1-206ENST00000510533 DUX4L4P0CJ87 422 aa11□□□□□ -0.65
NEK1-206ENST00000510533 DUX4L5P0CJ88 424 aa11□□□□□ -0.65
NEK1-206ENST00000510533 DUX4L6P0CJ89 424 aa11□□□□□ -0.65
NEK1-206ENST00000510533 DUX4L7P0CJ90 424 aa11□□□□□ -0.65
NEK1-206ENST00000510533 ZRANB3Q5FWF4 1079 aa11□□□□□ -0.65
NEK1-206ENST00000510533 AGAP9Q5VTM2 703 aa11□□□□□ -0.65
NEK1-206ENST00000510533 ZNF786Q8N393 782 aa11□□□□□ -0.65
NEK1-206ENST00000510533 NDUFA13Q9P0J0 144 aa11□□□□□ -0.65
NEK1-206ENST00000510533 DUX4Q9UBX2 424 aa11□□□□□ -0.65
NEK1-206ENST00000510533 ZNRF3Q9ULT6 936 aa11□□□□□ -0.65
NEK1-206ENST00000510533 NFIBO00712 420 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 MSH4O15457 936 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 CTSHP09668 335 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 MUTP22033 750 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 DENND1BQ6P3S1 775 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 FBXO33Q7Z6M2 555 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 SCUBE1Q8IWY4 988 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 GPR63Q9BZJ6 419 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 ZNF70Q9UC06 446 aaPredicted RBP10.99□□□□□ -0.65
NEK1-206ENST00000510533 RPS6KL1Q9Y6S9 549 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 TPST1O60507 370 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 KRT75O95678 551 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 IMPDH2P12268 514 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 ETFBP38117 255 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 RFX5P48382 616 aaPredicted RBP10.99□□□□□ -0.65
NEK1-206ENST00000510533 TMEM62Q0P6H9 643 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 KCNMA1Q12791 1236 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 CCDC81Q6ZN84 652 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 ATP8B4Q8TF62 1192 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 ZNF512Q96ME7 567 aaPredicted RBP10.99□□□□□ -0.65
NEK1-206ENST00000510533 BRD8Q9H0E9 1235 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 C10orf88Q9H8K7 445 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 EFCAB1Q9HAE3 211 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.99□□□□□ -0.65
NEK1-206ENST00000510533 VPS9D1Q9Y2B5 631 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 AP4S1Q9Y587 144 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 CDC42BPBQ9Y5S2 1711 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 KRT87PA6NCN2 255 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 HBP1O60381 514 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 PGK2P07205 417 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 SERPINB8P50452 374 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 HERVK_113P62684 666 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 TROAPQ12815 778 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 ADRM1Q16186 407 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 CCDC142Q17RM4 750 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.99□□□□□ -0.65
NEK1-206ENST00000510533 GPR141Q7Z602 305 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 SEPT5Q99719 369 aaPredicted RBP10.99□□□□□ -0.65
NEK1-206ENST00000510533 IL1RAPL1Q9NZN1 696 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 TSC22D4Q9Y3Q8 395 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 CAMTA2O94983 1202 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 ITGB3P05106 788 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 FAM200BP0CF97 657 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 EPHB2P29323 1055 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 SERPINB5P36952 375 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 MAP3K7CLP57077 242 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 DENND5BQ6ZUT9 1274 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 STKLD1Q8NE28 680 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 DIS3LQ8TF46 1054 aaKnown RBP10.99□□□□□ -0.65
NEK1-206ENST00000510533 PACSIN1Q9BY11 444 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 HPSEQ9Y251 543 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.99□□□□□ -0.65
NEK1-206ENST00000510533 SKAP2O75563 359 aaPredicted RBP10.99□□□□□ -0.65
NEK1-206ENST00000510533 CALB2P22676 271 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 SOAT1P35610 550 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 PNPLA4P41247 253 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 TFDP3Q5H9I0 405 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 IYDQ6PHW0 289 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 FAM151AQ8WW52 585 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 CDC42EP4Q9H3Q1 356 aaKnown RBP10.99□□□□□ -0.65
NEK1-206ENST00000510533 ERAP1Q9NZ08 941 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 RNF181Q9P0P0 153 aa10.99□□□□□ -0.65
NEK1-206ENST00000510533 HEATR9A2RTY3 570 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 STK25O00506 426 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 RPS6KA5O75582 802 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 SUPT7LO94864 414 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 GEMP55040 296 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 NUP107P57740 925 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 CSTF3Q12996 717 aaKnown RBP10.98□□□□□ -0.65
NEK1-206ENST00000510533 CRYMQ14894 314 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 TTI2Q6NXR4 508 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 CHSY1Q86X52 802 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 MICALL2Q8IY33 904 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 BTN2A2Q8WVV5 523 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 TUBGCP3Q96CW5 907 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 CCDC126Q96EE4 140 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 THUMPD3Q9BV44 507 aaKnown RBP10.98□□□□□ -0.65
NEK1-206ENST00000510533 SLC7A5P2Q9GIP4 190 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 SOX13Q9UN79 622 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 VWA5AO00534 786 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 TIMM44O43615 452 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 UGT3A1Q6NUS8 523 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 RBM43Q6ZSC3 357 aaKnown RBP10.98□□□□□ -0.65
NEK1-206ENST00000510533 DDHD1Q8NEL9 900 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 AGBL1Q96MI9 1066 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 BBS2Q9BXC9 721 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 KCTD10Q9H3F6 313 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 DCLRE1BQ9H816 532 aa10.98□□□□□ -0.65
NEK1-206ENST00000510533 EIF3LQ9Y262 564 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms