RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 EIF2AQ9BY44 585 aaKnown RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 NSRP1Q9H0G5 558 aaKnown RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 MRPL47Q9HD33 250 aaKnown RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 ASIC3Q9UHC3 531 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 PADI3Q9ULW8 664 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 TCEA3O75764 348 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 CLTAP09496 248 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 SELPP16109 830 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 RRM1P23921 792 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 TBXAS1P24557 533 aaPredicted RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 PIK3CAP42336 1068 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 IFI35P80217 286 aaPredicted RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 KYAT1Q16773 422 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 TWF2Q6IBS0 349 aaKnown RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 NECAB2Q7Z6G3 386 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 TMEM192Q8IY95 271 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 ANKS4BQ8N8V4 417 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 ATL2Q8NHH9 583 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 C1orf54Q8WWF1 131 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 FAM212AQ96EL1 285 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 CDC42EP4Q9H3Q1 356 aaKnown RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 RPF1Q9H9Y2 349 aaKnown RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 AAASQ9NRG9 546 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 CNTN6Q9UQ52 1028 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 ATP11BQ9Y2G3 1177 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 SQORQ9Y6N5 450 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 SCINQ9Y6U3 715 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 TP73O15350 636 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 ATF2P15336 505 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 ACO1P21399 889 aaKnown RBP16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 IVDP26440 423 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 WNT7BP56706 349 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 FAAP100Q0VG06 881 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 TDRD10Q5VZ19 366 aaKnown RBP16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 PIGWQ7Z7B1 504 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 PHF13Q86YI8 300 aaPredicted RBP16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 RHOT1Q8IXI2 618 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 KATNAL2Q8IYT4 538 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 FOXP3Q9BZS1 431 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 CHST12Q9NRB3 414 aa16.92■□□□□ 0.3
SQSTM1-213ENST00000510187 UMODL1Q5DID0 1318 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 CXCL8P10145 99 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 TNNI1P19237 187 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 GRM5P41594 1212 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 NOMO3P69849 1222 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 KLF1Q13351 362 aaPredicted RBP16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 CUL2Q13617 745 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 MBTPS1Q14703 1052 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 CCNG2Q16589 344 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 RELL1Q8IUW5 271 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 CCT6BQ92526 530 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 ACAP3Q96P50 834 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 CHST7Q9NS84 486 aa16.91■□□□□ 0.3
SQSTM1-213ENST00000510187 SMIM23A6NLE4 172 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 RASSF9O75901 435 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 TTC4O95801 387 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 GSTA1P08263 222 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 CNGA2Q16280 664 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 LRRC26Q2I0M4 334 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 UBXN11Q5T124 520 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 SWT1Q5T5J6 900 aaKnown RBP16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 PLEKHA7Q6IQ23 1121 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 CCDC25Q86WR0 208 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 CPA5Q8WXQ8 436 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 CCDC114Q96M63 670 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 HIPK3Q9H422 1215 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 SAMD15Q9P1V8 674 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 NEU2Q9Y3R4 380 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 HES2Q9Y543 173 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 VNN1O95497 513 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 EN2P19622 333 aaPredicted RBP16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 SURF1Q15526 300 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 UBAP2Q5T6F2 1119 aaKnown RBP16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 LMBRD2Q68DH5 695 aaPredicted RBP16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 CCDC89Q8N998 374 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 EXD1Q8NHP7 514 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 TRIM7Q9C029 511 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 SNTG2Q9NY99 539 aa16.9■□□□□ 0.3
SQSTM1-213ENST00000510187 CCT8L1PA6NM43 557 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 DNAJC8O75937 253 aaPredicted RBP16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 IL18RAPO95256 599 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 CETN2P41208 172 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 AP3M2P53677 418 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 ITGA8P53708 1063 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 LMNB2Q03252 620 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 SNX1Q13596 522 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 EXOC3L1Q86VI1 746 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 CCHCR1Q8TD31 782 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 APOL6Q9BWW8 343 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 ADAM22Q9P0K1 906 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms