RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.53
SNF8-207ENST00000509995 ARHGAP40Q5TG30 622 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 ARMCX5Q6P1M9 558 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 ZNF574Q6ZN55 896 aaPredicted RBP11.71□□□□□ -0.53
SNF8-207ENST00000509995 ERICH1Q86X53 443 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 DEPTORQ8TB45 409 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 OXER1Q8TDS5 423 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 LGMNQ99538 433 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 CDT1Q9H211 546 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 TMEM206Q9H813 350 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 CPNE5Q9HCH3 593 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 GMIPQ9P107 970 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 TUBGCP4Q9UGJ1 667 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 PCDHA4Q9UN74 947 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 NFE2L3Q9Y4A8 694 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 MYMKA6NI61 221 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 M0R2N6 131 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 BRINP1O60477 761 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 NDUFS2O75306 463 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 APODP05090 189 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 CKMP06732 381 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 USP17L7P0C7H9 530 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 ACTN2P35609 894 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 EIF2DP41214 584 aaKnown RBP11.7□□□□□ -0.54
SNF8-207ENST00000509995 GRK6P43250 576 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 NAMPTP43490 491 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 CDR1P51861 262 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 UCNP55089 124 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 CLDN6P56747 220 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 DMP1Q13316 513 aaPredicted RBP11.7□□□□□ -0.54
SNF8-207ENST00000509995 SUZ12Q15022 739 aaKnown RBP11.7□□□□□ -0.54
SNF8-207ENST00000509995 INF2Q27J81 1249 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 TBC1D25Q3MII6 688 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 ZNF568Q3ZCX4 644 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 SLC39A12Q504Y0 691 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 ZNF513Q8N8E2 541 aaPredicted RBP11.7□□□□□ -0.54
SNF8-207ENST00000509995 ENGASEQ8NFI3 743 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 OR10T2Q8NGX3 314 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 PIGOQ8TEQ8 1089 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 DNASE2BQ8WZ79 361 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 SLC22A12Q96S37 553 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 PNKPQ96T60 521 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 HSD17B14Q9BPX1 270 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 EIF2AK1Q9BQI3 630 aaKnown RBP11.7□□□□□ -0.54
SNF8-207ENST00000509995 KIFC3Q9BVG8 833 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 SH3GLB2Q9NR46 395 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 NAP1L2Q9ULW6 460 aaPredicted RBP11.7□□□□□ -0.54
SNF8-207ENST00000509995 TNFSF13BQ9Y275 285 aa11.7□□□□□ -0.54
SNF8-207ENST00000509995 HEMK1Q9Y5R4 338 aaPredicted RBP11.7□□□□□ -0.54
SNF8-207ENST00000509995 STK36Q9NRP7 1315 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 A0A0A0MRY4 1105 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 TRAV19A0A0A6YYK7 116 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 MEI4A8MW99 385 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 CYP17A1P05093 508 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 HOXB2P14652 356 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 NDUFV2P19404 249 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 TYMPP19971 482 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 EXOSC10Q01780 885 aaKnown RBP11.69□□□□□ -0.54
SNF8-207ENST00000509995 TARDBPQ13148 414 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNF8-207ENST00000509995 TTC22Q5TAA0 569 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 BROXQ5VW32 411 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 CREB3L3Q68CJ9 461 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 TMEM130Q8N3G9 435 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 SH3RF2Q8TEC5 729 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 NACC1Q96RE7 527 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 CYP2S1Q96SQ9 504 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 RNF26Q9BY78 433 aaPredicted RBP11.69□□□□□ -0.54
SNF8-207ENST00000509995 TRPC7Q9HCX4 862 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 CD93Q9NPY3 652 aa11.69□□□□□ -0.54
SNF8-207ENST00000509995 TP53BP1Q12888 1972 aaPredicted RBP11.68□□□□□ -0.54
SNF8-207ENST00000509995 SPTBN1Q01082 2364 aaKnown RBP11.68□□□□□ -0.54
SNF8-207ENST00000509995 TCF3P15923 654 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 GCFC2P16383 781 aaKnown RBP11.68□□□□□ -0.54
SNF8-207ENST00000509995 ATP2B1P20020 1258 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 LRPAP1P30533 357 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 GRIA2P42262 883 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 TNFRSF4P43489 277 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 CCR10P46092 362 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 SLC6A11P48066 632 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 EFNA5P52803 228 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 KDSRQ06136 332 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 RESTQ13127 1097 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 ZC2HC1CQ53FD0 456 aaPredicted RBP11.68□□□□□ -0.54
SNF8-207ENST00000509995 DSTYKQ6XUX3 929 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 TRMT11Q7Z4G4 463 aaKnown RBP11.68□□□□□ -0.54
SNF8-207ENST00000509995 C12orf40Q86WS4 652 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 BLIDQ8IZY5 108 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 ZNF248Q8NDW4 579 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 STKLD1Q8NE28 680 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 FAM117AQ9C073 453 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 MIR1-1HGQ9H1L0 117 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 PTPRHQ9HD43 1115 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 ARHGEF4Q9NR80 690 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 FTSJ1Q9UET6 329 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 MAGED2Q9UNF1 606 aaPredicted RBP11.68□□□□□ -0.54
SNF8-207ENST00000509995 PCDHGA1Q9Y5H4 931 aa11.68□□□□□ -0.54
SNF8-207ENST00000509995 TLN1Q9Y490 2541 aaKnown RBP11.67□□□□□ -0.54
SNF8-207ENST00000509995 A0A087WWV3 80 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 A0A1W2PQF6 199 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 BCAT2O15382 392 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms