RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 ANXA13P27216 316 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 PCSK1P29120 753 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 TIE1P35590 1138 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 MRPS21P82921 87 aaKnown RBP11.11□□□□□ -0.63
MBD4-208ENST00000509828 GFPT1Q06210 699 aaPredicted RBP11.11□□□□□ -0.63
MBD4-208ENST00000509828 POSTNQ15063 836 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 ZNF77Q15935 545 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 CRY1Q16526 586 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 EOGTQ5NDL2 527 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 LYSMD4Q5XG99 296 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 TMEM86AQ8N2M4 240 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 PDCL2Q8N4E4 241 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 CSGALNACT2Q8N6G5 542 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 ALLCQ8N6M5 410 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
MBD4-208ENST00000509828 MDGA1Q8NFP4 955 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 RIN3Q8TB24 985 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 SPATA18Q8TC71 538 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 HMGB4Q8WW32 186 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 EZH1Q92800 747 aaPredicted RBP11.11□□□□□ -0.63
MBD4-208ENST00000509828 GATA6Q92908 595 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 TRMT2BQ96GJ1 504 aaKnown RBP11.11□□□□□ -0.63
MBD4-208ENST00000509828 SLC22A12Q96S37 553 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 PNKPQ96T60 521 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 ABCB6Q9NP58 842 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 TRPM5Q9NZQ8 1165 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 EVLQ9UI08 416 aaPredicted RBP11.11□□□□□ -0.63
MBD4-208ENST00000509828 MSRB2Q9Y3D2 182 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 PCDHB9Q9Y5E1 797 aa11.11□□□□□ -0.63
MBD4-208ENST00000509828 NUP210Q8TEM1 1887 aaPredicted RBP11.1□□□□□ -0.63
MBD4-208ENST00000509828 C2orf78A6NCI8 922 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 H0Y626 953 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 H3BQV1 296 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 K7EQS6 105 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 SLC9A3R1O14745 358 aaPredicted RBP11.1□□□□□ -0.63
MBD4-208ENST00000509828 OPHN1O60890 802 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 TRIM16O95361 564 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 ITGB3P05106 788 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 POLR2BP30876 1174 aaKnown RBP11.1□□□□□ -0.63
MBD4-208ENST00000509828 GRIK1P39086 918 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 LHX1P48742 406 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 ATP2C1P98194 919 aaPredicted RBP11.1□□□□□ -0.63
MBD4-208ENST00000509828 USP4Q13107 963 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 MCM6Q14566 821 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 ZC2HC1CQ53FD0 456 aaPredicted RBP11.1□□□□□ -0.63
MBD4-208ENST00000509828 INTS6LQ5JSJ4 861 aaKnown RBP11.1□□□□□ -0.63
MBD4-208ENST00000509828 C4orf50Q6ZRC1 276 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 RASSF3Q86WH2 238 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 NT5DC4Q86YG4 428 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 DEFB119Q8N690 84 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 TXNDC5Q8NBS9 432 aaKnown RBP11.1□□□□□ -0.63
MBD4-208ENST00000509828 CEP76Q8TAP6 659 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 LEO1Q8WVC0 666 aaPredicted RBP11.1□□□□□ -0.63
MBD4-208ENST00000509828 MYRFLQ96LU7 910 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 FAM213AQ9BRX8 229 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 EHD2Q9NZN4 543 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 MAGEC2Q9UBF1 373 aaPredicted RBP11.1□□□□□ -0.63
MBD4-208ENST00000509828 KLK13Q9UKR3 277 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 SLC6A14Q9UN76 642 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 ARHGAP26Q9UNA1 814 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 EXOC7Q9UPT5 735 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 WASF3Q9UPY6 502 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 SNX9Q9Y5X1 595 aa11.1□□□□□ -0.63
MBD4-208ENST00000509828 ATXN2Q99700 1313 aaKnown RBP11.09□□□□□ -0.63
MBD4-208ENST00000509828 SPAG17Q6Q759 2223 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 ATG2BQ96BY7 2078 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 KIF26AQ9ULI4 1882 aaPredicted RBP11.09□□□□□ -0.63
MBD4-208ENST00000509828 TCRBV21S2A2A0A5A6 115 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 EIF4E1BA6NMX2 242 aaKnown RBP11.09□□□□□ -0.63
MBD4-208ENST00000509828 TISP43B9A030 160 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 LEFTY2O00292 366 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 AP5Z1O43299 807 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 PLCG1P19174 1290 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 OPRD1P41143 372 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 P2RY2P41231 377 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 PTGER3P43115 390 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 SLC6A11P48066 632 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 RBP5P82980 135 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 GTF2BQ00403 316 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 CYP27A1Q02318 531 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 RPL6Q02878 288 aaKnown RBP11.09□□□□□ -0.63
MBD4-208ENST00000509828 MYO1EQ12965 1108 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 RESTQ13127 1097 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 DUOXA1Q1HG43 343 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 TMEM119Q4V9L6 283 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 BTBD8Q5XKL5 378 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 SLC39A4Q6P5W5 647 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 RABEPKQ7Z6M1 372 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 FILIP1Q7Z7B0 1213 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 ADGRF2Q8IZF7 708 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 SYCP3Q8IZU3 236 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 CHCHD4Q8N4Q1 142 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 LRRC15Q8TF66 581 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 AK8Q96MA6 479 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 ARHGEF4Q9NR80 690 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 SMPD4Q9NXE4 827 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 L1RE1Q9UN81 338 aa11.09□□□□□ -0.63
MBD4-208ENST00000509828 ZFHX4Q86UP3 3567 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms