RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PTF1AQ7RTS3 328 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 WDR63Q8IWG1 891 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 DNAJC5GQ8N7S2 189 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 CCDC191Q8NCU4 936 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 TMX4Q9H1E5 349 aaPredicted RBP5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 GSTO2Q9H4Y5 243 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 A1CFQ9NQ94 594 aaKnown RBP5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 SEMA4GQ9NTN9 838 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 KCTD5Q9NXV2 234 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 FRMD4BQ9Y2L6 1034 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 LRRFIP2Q9Y608 721 aaKnown RBP5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 NALCNQ8IZF0 1738 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 TNS1Q9HBL0 1735 aaKnown RBP5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 PLEKHG2Q9H7P9 1386 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 DAPK1P53355 1430 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 GOLGB1Q14789 3259 aaKnown RBP5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 MYOM1P52179 1685 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 ADGRL2O95490 1459 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 A6NNZ2 444 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 H0YHG0 523 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 KIAA0391O15091 583 aaKnown RBP5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 CTAGE5O15320 804 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 IPO8O15397 1037 aaKnown RBP5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 EPB41L2O43491 1005 aaKnown RBP5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 C1QL1O75973 258 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 AMY1AP04745 511 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 SETSIPP0DME0 302 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 CCDC192P0DO97 292 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 ALAS1P13196 640 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 TNNT1P13805 278 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 MTNR1BP49286 362 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 CACNA2D1P54289 1103 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 EIF5P55010 431 aaKnown RBP5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 FAPQ12884 760 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 TUBB8Q3ZCM7 444 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 SKAP1Q86WV1 359 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 COLGALT2Q8IYK4 626 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 ZGPATQ8N5A5 531 aaKnown RBP5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 FITM2Q8N6M3 262 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 TBC1D15Q8TC07 691 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 SSH3Q8TE77 659 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 NUP133Q8WUM0 1156 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 SLC2A13Q96QE2 648 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 PNKPQ96T60 521 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 KLK15Q9H2R5 256 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 DMTF1Q9Y222 760 aa5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 RRP15Q9Y3B9 282 aaKnown RBP5.16□□□□□ -1.58
PDLIM5-211ENST00000508531 CLTCL1P53675 1640 aa5.15□□□□□ -1.58
PDLIM5-211ENST00000508531 NUP188Q5SRE5 1749 aa5.15□□□□□ -1.58
PDLIM5-211ENST00000508531 XRN1Q8IZH2 1706 aaKnown RBP5.15□□□□□ -1.58
PDLIM5-211ENST00000508531 KAT6AQ92794 2004 aa5.15□□□□□ -1.58
PDLIM5-211ENST00000508531 KLHL33A6NCF5 533 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 LRRC3CA6NJW4 275 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 FAM171A2A8MVW0 826 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 EYA4O95677 639 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 MX1P20591 662 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 DDCP20711 480 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 ACTN2P35609 894 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 MASP1P48740 699 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 PTPN14Q15678 1187 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 TPD52L1Q16890 204 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 KRBA2Q6ZNG9 492 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 C10orf67Q8IYJ2 551 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 LNX2Q8N448 690 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 OTUD6BQ8N6M0 293 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 DNAAF4Q8WXU2 420 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 DPF2Q92785 391 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 ITFG2Q969R8 447 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 CYFIP2Q96F07 1278 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 MANSC1Q9H8J5 431 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 IL17RBQ9NRM6 502 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 STK26Q9P289 416 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 SUFUQ9UMX1 484 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 TRPM1Q7Z4N2 1603 aa5.15□□□□□ -1.59
PDLIM5-211ENST00000508531 ERBINQ96RT1 1412 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 ATP10DQ9P241 1426 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 ANKRD50Q9ULJ7 1429 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 LMTK2Q8IWU2 1503 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 TRGV11A0A075B6L2 103 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 A0A087WUV0 522 aaPredicted RBP5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 MYADML2A6NDP7 307 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 RBMXL2O75526 392 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 SMC2O95347 1197 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 IPO7O95373 1038 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 FCER1AP12319 257 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 H2AFXP16104 143 aaPredicted RBP5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 RDXP35241 583 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 GSDMDP57764 484 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 UBE2HP62256 183 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 NUCB1Q02818 461 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 SF3B3Q15393 1217 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 SYT10Q6XYQ8 523 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 SPATS2Q86XZ4 545 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 GPATCH11Q8N954 259 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 GPT2Q8TD30 523 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 COG1Q8WTW3 980 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 TTC12Q9H892 705 aaPredicted RBP5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 ASB6Q9NWX5 421 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 STK32BQ9NY57 414 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms