RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 GHRHRQ02643 423 aa14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 ENPEPQ07075 957 aa14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 ZC3H12AQ5D1E8 599 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 ALYREFQ86V81 257 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 UNC45BQ8IWX7 931 aa14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 FBXO27Q8NI29 283 aa14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 GJD4Q96KN9 370 aaPredicted RBP14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 PAPOLBQ9NRJ5 636 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 XPO7Q9UIA9 1087 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 SCAF8Q9UPN6 1271 aaKnown RBP14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
SNCAIP-209ENST00000508017 E7ESA3 106 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 FCHO1O14526 889 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 DNAJC6O75061 913 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 EDN1P05305 212 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 CD48P09326 243 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 DHRS4L1P0CG22 281 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 PYGBP11216 843 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 HARSP12081 509 aaKnown RBP14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 IL1R2P27930 398 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 NEK3P51956 506 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 ZNF132P52740 706 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 OCRLQ01968 901 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 FAAP100Q0VG06 881 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 PTK7Q13308 1070 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 THOC5Q13769 683 aaKnown RBP14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 PPP1R15BQ5SWA1 713 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 ARHGEF16Q5VV41 709 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 FOXB2Q5VYV0 432 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 PCGF5Q86SE9 256 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 SEPT12Q8IYM1 358 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 WDTC1Q8N5D0 677 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 NMUR2Q9GZQ4 415 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 TJP2Q9UDY2 1190 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 MTO1Q9Y2Z2 717 aaKnown RBP14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 CALB1P05937 261 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 PAPOLAP51003 745 aaKnown RBP14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 NCOA4Q13772 614 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 MTERF2Q49AM1 385 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 MDH1BQ5I0G3 518 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 CCDC60Q8IWA6 550 aaPredicted RBP14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 ARFGAP1Q8N6T3 406 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 TMEM143Q96AN5 459 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 SYNCQ9H7C4 482 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 KRT82Q9NSB4 513 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 LTBP4Q8N2S1 1624 aa14.06□□□□□ -0.16
SNCAIP-209ENST00000508017 AP1G2O75843 785 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 DGAT1O75907 488 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 CST3P01034 146 aaPredicted RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 RARBP10826 455 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 ELK3P41970 407 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 PRKCEQ02156 737 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 BIRC2Q13490 618 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 CIAPIN1Q6FI81 312 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 GPAT2Q6NUI2 795 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 CCDC62Q6P9F0 684 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 NLGN1Q8N2Q7 840 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 PDCD7Q8N8D1 485 aaKnown RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 FAM71DQ8N9W8 422 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 MCPH1Q8NEM0 835 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 RSAD2Q8WXG1 361 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 STMN2Q93045 179 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 ALKBH8Q96BT7 664 aaKnown RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 IFT43Q96FT9 208 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 OXNAD1Q96HP4 312 aaPredicted RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 APOPT1Q96IL0 206 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 TARS2Q9BW92 718 aaKnown RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 PPP1R12CQ9BZL4 782 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 CYP26B1Q9NR63 512 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 DDX56Q9NY93 547 aaKnown RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 CNTNAP2Q9UHC6 1331 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 FAM155BO75949 473 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 SKIP12755 728 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 KCNA3P22001 575 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 TBXAS1P24557 533 aaPredicted RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 RFC1P35251 1148 aaPredicted RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 BASP1P80723 227 aaKnown RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 SLC25A11Q02978 314 aaKnown RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 AP1B1Q10567 949 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 PIGHQ14442 188 aaPredicted RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 KRT72Q14CN4 511 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 KBTBD12Q3ZCT8 623 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 CDHR3Q6ZTQ4 885 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 SH2D5Q6ZV89 423 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 CHSY1Q86X52 802 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 TREML1Q86YW5 311 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 UBR7Q8N806 425 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 JOSD2Q8TAC2 188 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 CGRRF1Q99675 332 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 MSTO1Q9BUK6 570 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 MECRQ9BV79 373 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 SLC38A10Q9HBR0 1119 aa14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 STX18Q9P2W9 335 aaKnown RBP14.05□□□□□ -0.16
SNCAIP-209ENST00000508017 TCRBV9S1A1TA0A576 114 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 KBTBD13C9JR72 458 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 SNUPNO95149 360 aaKnown RBP14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 CHRNA5P30532 468 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 PGM1P36871 562 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms