RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ITIH3Q06033 890 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 TWF1Q12792 350 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 PLD1Q13393 1074 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 STILQ15468 1287 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 SKIV2LQ15477 1246 aaKnown RBP13.62□□□□□ -0.23
TCOF1-210ENST00000506767 DDR2Q16832 855 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 PKDCCQ504Y2 493 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 LCLAT1Q6UWP7 414 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 EP400NLQ6ZTU2 488 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 GPR149Q86SP6 731 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 VSTM4Q8IW00 320 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 ANKRD52Q8NB46 1076 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 SMRP1Q8NCR6 262 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 ZMIZ2Q8NF64 920 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 ZNF606Q8WXB4 792 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 IQCDQ96DY2 449 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 SMARCD1Q96GM5 515 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 SPATA17Q96L03 361 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 C8orf48Q96LL4 319 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 SPAG5Q96R06 1193 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 SEPT5Q99719 369 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-210ENST00000506767 SMOQ99835 787 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 DUSP16Q9BY84 665 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 TRIM5Q9C035 493 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 ADAM7Q9H2U9 754 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 ACP6Q9NPH0 428 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 TSPAN16Q9UKR8 245 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.62□□□□□ -0.23
TCOF1-210ENST00000506767 ATP8B3O60423 1300 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 CUL9Q8IWT3 2517 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 GREB1Q4ZG55 1949 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 TRIM66O15016 1216 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 CCL16O15467 120 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 AP1G2O75843 785 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 KCNA5P22460 613 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 BRD2P25440 801 aaKnown RBP13.61□□□□□ -0.23
TCOF1-210ENST00000506767 ADORA2BP29275 332 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 GNA15P30679 374 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 GRIK1P39086 918 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 STAT1P42224 750 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 ZNF75DP51815 510 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 BPIFB4P59827 614 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 PTK2Q05397 1052 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 MEA1Q16626 185 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 LEXMQ3ZCV2 418 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 RARS2Q5T160 578 aaKnown RBP13.61□□□□□ -0.23
TCOF1-210ENST00000506767 SPECC1LQ69YQ0 1117 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 TMC5Q6UXY8 1006 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 CLEC20AQ6ZU45 233 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 CACNA2D4Q7Z3S7 1137 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 SLC47A2Q86VL8 602 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 TTC30AQ86WT1 665 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 PSMG2Q969U7 264 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 MRFAP1L1Q96HT8 127 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 KCNK16Q96T55 309 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 LRRC3Q9BY71 257 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 UBXN6Q9BZV1 441 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 KRT82Q9NSB4 513 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 CD207Q9UJ71 328 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 CAPN11Q9UMQ6 739 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 ASB3Q9Y575 518 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.61□□□□□ -0.236e-7■■■□□ 17.5
TCOF1-210ENST00000506767 C2orf16Q68DN1 1984 aa13.61□□□□□ -0.23
TCOF1-210ENST00000506767 PATJQ8NI35 1801 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 HHLA1C9JL84 531 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 F8VP50 259 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 H3BQ06 376 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-210ENST00000506767 TNFRSF10BO14763 440 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 MED7O43513 233 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 XYLBO75191 536 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 GFPT2O94808 682 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 GYPCP04921 128 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 FAM200BP0CF97 657 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 CYP11B1P15538 503 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 NPR3P17342 541 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 EPHB3P54753 998 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 GOLGA7BQ2TAP0 167 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 SDHAF4Q5VUM1 108 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 DNAJB7Q7Z6W7 309 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-210ENST00000506767 SCN4BQ8IWT1 228 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-210ENST00000506767 DDX1Q92499 740 aaKnown RBP13.6□□□□□ -0.23
TCOF1-210ENST00000506767 SUSD6Q92537 303 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 SMG7Q92540 1137 aaKnown RBP13.6□□□□□ -0.23
TCOF1-210ENST00000506767 ZNF512Q96ME7 567 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-210ENST00000506767 APOL5Q9BWW9 433 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 PNPLA8Q9NP80 782 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 DMAP1Q9NPF5 467 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-210ENST00000506767 AIPL1Q9NZN9 384 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 DNMT3BQ9UBC3 853 aaKnown RBP13.6□□□□□ -0.23
TCOF1-210ENST00000506767 PCDHGC3Q9UN70 934 aa13.6□□□□□ -0.23
TCOF1-210ENST00000506767 NOTCH4Q99466 2003 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 GRXCR2A6NFK2 248 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 LRRC53A6NM62 1247 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 SLC38A8A6NNN8 435 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 THAP12O43422 761 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 MBTPS2O43462 519 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 MICAL2O94851 1124 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 CFHP08603 1231 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms