RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SP9P0CG40 484 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 DMDP11532 3685 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 GNL1P36915 607 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 TNNC1P63316 161 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 DLG4P78352 724 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 TRPC3Q13507 836 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 OTOGLQ3ZCN5 2332 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 ZACNQ401N2 412 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 ZCWPW2Q504Y3 356 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 TXNDC8Q6A555 127 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 MON1AQ86VX9 555 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 GPIHBP1Q8IV16 184 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 YAF2Q8IY57 180 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 FMR1NBQ8N0W7 255 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 CELF5Q8N6W0 485 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 ENGASEQ8NFI3 743 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 BPIFB1Q8TDL5 484 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 USP13Q92995 863 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 PCED1BQ96HM7 432 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 TTLL2Q9BWV7 592 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 ANAPC1Q9H1A4 1944 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 SNX25Q9H3E2 840 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 KIF9Q9HAQ2 790 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 TMEM30AQ9NV96 361 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 MAGEC2Q9UBF1 373 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 FBXO4Q9UKT5 387 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 MAGED2Q9UNF1 606 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 CCL26Q9Y258 94 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 MYO15AQ9UKN7 3530 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 EP300Q09472 2414 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 GPR179Q6PRD1 2367 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 IKBKBO14920 756 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 CALUO43852 315 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 PHACTR2O75167 634 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 CHRNB1P11230 501 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 PTPN1P18031 435 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 BDNFP23560 247 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 AVPR1AP37288 418 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 NUCB2P80303 420 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 ENPEPQ07075 957 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 BIRC3Q13489 604 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 NCOA4Q13772 614 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF268Q14587 947 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF699Q32M78 642 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF528Q3MIS6 628 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 MDH1BQ5I0G3 518 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 WDR44Q5JSH3 913 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 C1orf228Q6PIY5 440 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 TXNDC11Q6PKC3 985 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 SV2AQ7L0J3 742 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 RALGPS2Q86X27 583 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 SCN4BQ8IWT1 228 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 MAB21L3Q8N8X9 362 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 B3GALNT2Q8NCR0 500 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 OR6B3Q8NGW1 331 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 SPATA20Q8TB22 786 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 RIN3Q8TB24 985 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 CSGALNACT1Q8TDX6 532 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 FAM3CQ92520 227 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 MRPS31Q92665 395 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 NELL1Q92832 810 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 NKD2Q969F2 451 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 CCDC47Q96A33 483 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 ZFYVE19Q96K21 471 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 C8orf48Q96LL4 319 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 FAM83CQ9BQN1 747 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 IER2Q9BTL4 223 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 SMG9Q9H0W8 520 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 SDCBP2Q9H190 292 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 CHRDQ9H2X0 955 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 SEMA4AQ9H3S1 761 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 DPEP3Q9H4B8 488 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 SMYD3Q9H7B4 428 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 C8orf33Q9H7E9 229 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 PRMT8Q9NR22 394 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 TDP1Q9NUW8 608 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 GCNT4Q9P109 453 aa9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 NXF1Q9UBU9 619 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 NDRG2Q9UN36 371 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-209ENST00000506632 USP34Q70CQ2 3546 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF638Q14966 1978 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 A8MXQ7 604 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 SPECC1L-ADORA2AF8WAN1 911 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 TRIM66O15016 1216 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 LAMTOR5O43504 91 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 AKAP3O75969 853 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 ASS1P00966 412 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 TDGF1P13385 188 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 TCF3P15923 654 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 NR2F2P24468 414 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 CCNE1P24864 410 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 CTHP32929 405 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 SOX9P48436 509 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 VAMP7P51809 220 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 CACNA2D1P54289 1103 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 CDH8P55286 799 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 USP46P62068 366 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 NOP14P78316 857 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 CYP27A1Q02318 531 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms