RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 PTH2RP49190 550 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 DGKEP52429 567 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 HTRA4P83105 476 aaPredicted RBP4.78□□□□□ -1.64
CHD1-203ENST00000505657 KRT17Q04695 432 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 TBCCQ15814 346 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 PTCHD3Q3KNS1 767 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 ICE2Q659A1 982 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 KAZNQ674X7 775 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 CCAR1Q8IX12 1150 aaKnown RBP4.78□□□□□ -1.64
CHD1-203ENST00000505657 PJA1Q8NG27 643 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 BPIFB1Q8TDL5 484 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 PHKBQ93100 1093 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 NAA15Q9BXJ9 866 aaKnown RBP4.78□□□□□ -1.64
CHD1-203ENST00000505657 NUP62CLQ9H1M0 184 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 GEMIN8Q9NWZ8 242 aaKnown RBP4.78□□□□□ -1.64
CHD1-203ENST00000505657 H7C4K7 107 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 KIAA0355O15063 1070 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 RHOBTB3O94955 611 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 VNN1O95497 513 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 NR2F6P10588 404 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 LRPAP1P30533 357 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 E2F2Q14209 437 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 SAFBQ15424 915 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHD1-203ENST00000505657 SLC44A4Q53GD3 710 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 PRR16Q569H4 304 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 ZNF362Q5T0B9 420 aaPredicted RBP4.77□□□□□ -1.65
CHD1-203ENST00000505657 DEPDC1Q5TB30 811 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 SFRP4Q6FHJ7 346 aaPredicted RBP4.77□□□□□ -1.65
CHD1-203ENST00000505657 SIMC1Q8NDZ2 872 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 TMEM171Q8WVE6 324 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 SPSB4Q96A44 273 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 PBKQ96KB5 322 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 MSLNLQ96KJ4 702 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 TBCBQ99426 244 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 CHST8Q9H2A9 424 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 ARNT2Q9HBZ2 717 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 IL17RBQ9NRM6 502 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 DNMT3BQ9UBC3 853 aaKnown RBP4.77□□□□□ -1.65
CHD1-203ENST00000505657 MID2Q9UJV3 735 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 ST3GAL5Q9UNP4 418 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 SNX14Q9Y5W7 946 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 SNX13Q9Y5W8 968 aa4.77□□□□□ -1.65
CHD1-203ENST00000505657 RHPN2P1A8MT19 583 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 RASSF9O75901 435 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 XRCC6P12956 609 aaKnown RBP eCLIP4.76□□□□□ -1.65
CHD1-203ENST00000505657 JUPP14923 745 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 GRIA3P42263 894 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 PRIM2P49643 509 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 RARRES1P49788 294 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 ITGA8P53708 1063 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 ZNF543Q08ER8 600 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 LY6KQ17RY6 165 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 NBPF8Q3BBV2 869 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 MGAT5BQ3V5L5 792 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 KLHDC7AQ5VTJ3 777 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 UNC13DQ70J99 1090 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 DTX2Q86UW9 622 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 LIX1LQ8IVB5 337 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 SLC15A3Q8IY34 581 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 PCSK5Q92824 1860 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 GLG1Q92896 1179 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 NELL2Q99435 816 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 CDY1Q9Y6F8 540 aa4.76□□□□□ -1.65
CHD1-203ENST00000505657 CAND2O75155 1236 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 IL6RP08887 468 aaPredicted RBP4.75□□□□□ -1.65
CHD1-203ENST00000505657 TXNP10599 105 aaKnown RBP4.75□□□□□ -1.65
CHD1-203ENST00000505657 TSHRP16473 764 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 ZFXP17010 805 aaPredicted RBP4.75□□□□□ -1.65
CHD1-203ENST00000505657 CARSP49589 748 aaKnown RBP4.75□□□□□ -1.65
CHD1-203ENST00000505657 PDE6CP51160 858 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 CASP5P51878 434 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 ATXN1P54253 815 aaKnown RBP4.75□□□□□ -1.65
CHD1-203ENST00000505657 PRKAG1P54619 331 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 DAG1Q14118 895 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 TREML2Q5T2D2 321 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 CACHD1Q5VU97 1274 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 FCRL6Q6DN72 434 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 IL31Q6EBC2 164 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 DNAJB14Q8TBM8 379 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 PARD3BQ8TEW8 1205 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 SLC9A6Q92581 669 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 PPP2R3CQ969Q6 453 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 R3HDM4Q96D70 268 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 ZG16BQ96DA0 208 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 CCDC136Q96JN2 1154 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 SNX22Q96L94 193 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 PPP1R9BQ96SB3 815 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 ALG8Q9BVK2 526 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 GBA2Q9HCG7 927 aaPredicted RBP4.75□□□□□ -1.65
CHD1-203ENST00000505657 XPNPEP3Q9NQH7 507 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 CHST12Q9NRB3 414 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 EHD3Q9NZN3 535 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 ITGB1BP2Q9UKP3 347 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 HDAC9Q9UKV0 1011 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 PAXBP1Q9Y5B6 917 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 FER1L4A9Z1Z3 1794 aa4.75□□□□□ -1.65
CHD1-203ENST00000505657 ZAR1LA6NP61 321 aa4.74□□□□□ -1.65
CHD1-203ENST00000505657 RAB27BO00194 218 aa4.74□□□□□ -1.65
CHD1-203ENST00000505657 SLC16A3O15427 465 aaKnown RBP4.74□□□□□ -1.65
CHD1-203ENST00000505657 RRP9O43818 475 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms