RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 EML3Q32P44 896 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 SLC10A6Q3KNW5 377 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 LYSMD4Q5XG99 296 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 ARMCX5Q6P1M9 558 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 CC2D1AQ6P1N0 951 aaPredicted RBP6.52□□□□□ -1.37
GYPB-204ENST00000504951 ZNF605Q86T29 641 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 USP37Q86T82 979 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 CATSPER3Q86XQ3 398 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 ATAD1Q8NBU5 361 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 MDGA1Q8NFP4 955 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 DEPTORQ8TB45 409 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 SPPL2BQ8TCT7 592 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 PIGOQ8TEQ8 1089 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 WHAMMQ8TF30 809 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 HNRNPLLQ8WVV9 542 aaKnown RBP6.52□□□□□ -1.37
GYPB-204ENST00000504951 BSNDQ8WZ55 320 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 HPS1Q92902 700 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 TRMT2BQ96GJ1 504 aaKnown RBP6.52□□□□□ -1.37
GYPB-204ENST00000504951 IFT74Q96LB3 600 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 MYRFLQ96LU7 910 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 CEP295NLQ96MC4 621 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 CCDC43Q96MW1 224 aaKnown RBP6.52□□□□□ -1.37
GYPB-204ENST00000504951 MRPL4Q9BYD3 311 aaKnown RBP6.52□□□□□ -1.37
GYPB-204ENST00000504951 TM6SF1Q9BZW5 370 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 CDT1Q9H211 546 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 FAM124BQ9H5Z6 455 aaPredicted RBP6.52□□□□□ -1.37
GYPB-204ENST00000504951 PRORYQ9H606 182 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 TMEM206Q9H813 350 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 PDRG1Q9NUG6 133 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 POLR3BQ9NW08 1133 aaPredicted RBP6.52□□□□□ -1.37
GYPB-204ENST00000504951 ARHGAP28Q9P2N2 729 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 USP20Q9Y2K6 914 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 DENND4CQ5VZ89 1909 aa6.52□□□□□ -1.37
GYPB-204ENST00000504951 STK36Q9NRP7 1315 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 TTC26A0AVF1 554 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 EPB41L2O43491 1005 aaKnown RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 XPOTO43592 962 aaKnown RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 KALRNO60229 2985 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 USO1O60763 962 aaKnown RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 PFKFB2O60825 505 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 ARSAP15289 507 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 SCP2P22307 547 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 PTGER3P43115 390 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 TNFRSF4P43489 277 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 ATXN3P54252 364 aaPredicted RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 NLRP12P59046 1061 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 LILRA4P59901 499 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 POU5F1Q01860 360 aaKnown RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 BFSP1Q12934 665 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 ZNF77Q15935 545 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 TMEM132AQ24JP5 1023 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 TRIM68Q6AZZ1 485 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 OVOS1Q6IE37 1185 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 CPLX2Q6PUV4 134 aaKnown RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 MPZL3Q6UWV2 235 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 MAEAQ7L5Y9 396 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 GALNT15Q8N3T1 639 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 MINDY1Q8N5J2 469 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 NECAB1Q8N987 351 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 BAHD1Q8TBE0 780 aaPredicted RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 ZNF419Q96HQ0 510 aaPredicted RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 LRIG1Q96JA1 1093 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 DUSP9Q99956 384 aaKnown RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 CCSER1Q9C0I3 900 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 ZCWPW1Q9H0M4 648 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 UXTQ9UBK9 157 aaPredicted RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 DSEQ9UL01 958 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 UBQLN1Q9UMX0 589 aaKnown RBP6.51□□□□□ -1.37
GYPB-204ENST00000504951 CCL26Q9Y258 94 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 RAXQ9Y2V3 346 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 PCDHB9Q9Y5E1 797 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 PCDHGB2Q9Y5G2 931 aa6.51□□□□□ -1.37
GYPB-204ENST00000504951 KIAA1549LQ6ZVL6 1849 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 SHROOM3Q8TF72 1996 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 BTBD18B2RXH4 712 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 SH3BP5O60239 455 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 TOM1L1O75674 476 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ZIC2O95409 532 aaPredicted RBP6.5□□□□□ -1.37
GYPB-204ENST00000504951 NFATC1O95644 943 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 USP17L7P0C7H9 530 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 CSH1P0DML2 217 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 CSH2P0DML3 217 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 HAPLN1P10915 354 aaPredicted RBP6.5□□□□□ -1.37
GYPB-204ENST00000504951 ATF6P18850 670 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ITPKAP23677 461 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 OPRD1P41143 372 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 KIR2DL1P43626 348 aaPredicted RBP6.5□□□□□ -1.37
GYPB-204ENST00000504951 MAPK8P45983 427 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 PDE6CP51160 858 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 CYP4F8P98187 520 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 MCL1Q07820 350 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 USP4Q13107 963 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ORC2Q13416 577 aaPredicted RBP6.5□□□□□ -1.37
GYPB-204ENST00000504951 MTF1Q14872 753 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 CALCRLQ16602 461 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ME3Q16798 604 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 GAB4Q2WGN9 574 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ZNF568Q3ZCX4 644 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 EOGTQ5NDL2 527 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ANO7Q6IWH7 933 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms