RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 MYO1EQ12965 1108 aa13.58□□□□□ -0.24
LSM6-204ENST00000504181 HSF5Q4G112 596 aaPredicted RBP13.58□□□□□ -0.24
LSM6-204ENST00000504181 SYCP2LQ5T4T6 812 aa13.58□□□□□ -0.24
LSM6-204ENST00000504181 SLFN12Q8IYM2 578 aa13.58□□□□□ -0.24
LSM6-204ENST00000504181 SH3RF2Q8TEC5 729 aa13.58□□□□□ -0.24
LSM6-204ENST00000504181 BRF1Q92994 677 aa13.58□□□□□ -0.24
LSM6-204ENST00000504181 ERLEC1Q96DZ1 483 aa13.58□□□□□ -0.24
LSM6-204ENST00000504181 ACO2Q99798 780 aaKnown RBP13.58□□□□□ -0.24
LSM6-204ENST00000504181 NCOA5Q9HCD5 579 aaKnown RBP13.58□□□□□ -0.24
LSM6-204ENST00000504181 CD93Q9NPY3 652 aa13.58□□□□□ -0.24
LSM6-204ENST00000504181 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
LSM6-204ENST00000504181 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.58□□□□□ -0.24
LSM6-204ENST00000504181 SPTAN1Q13813 2472 aaKnown RBP13.58□□□□□ -0.24
LSM6-204ENST00000504181 TADA3O75528 432 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 KAT7O95251 611 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 CER1O95813 267 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 APODP05090 189 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 USP17L7P0C7H9 530 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 ZNF883P0CG24 379 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 C6P13671 934 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 CPA1P15085 419 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 MATKP42679 507 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 AARSP49588 968 aaKnown RBP eCLIP13.57□□□□□ -0.24
LSM6-204ENST00000504181 CSRP3P50461 194 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 EFNA5P52803 228 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 CLDN6P56747 220 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 TLE3Q04726 772 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 KDSRQ06136 332 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 PPP2R5AQ15172 486 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 PREPLQ4J6C6 727 aaPredicted RBP13.57□□□□□ -0.24
LSM6-204ENST00000504181 SEZ6Q53EL9 994 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 ZC2HC1CQ53FD0 456 aaPredicted RBP13.57□□□□□ -0.24
LSM6-204ENST00000504181 C6orf118Q5T5N4 469 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 RNF20Q5VTR2 975 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 Q6ZUG5 572 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 ZCCHC9Q8N567 271 aaKnown RBP13.57□□□□□ -0.24
LSM6-204ENST00000504181 ZNF419Q96HQ0 510 aaPredicted RBP13.57□□□□□ -0.24
LSM6-204ENST00000504181 PNKPQ96T60 521 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 TRIM4Q9C037 500 aa13.57□□□□□ -0.24
LSM6-204ENST00000504181 DAXXQ9UER7 740 aaPredicted RBP13.57□□□□□ -0.24
LSM6-204ENST00000504181 BOD1L1Q8NFC6 3051 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 TRAV19A0A0A6YYK7 116 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 MYMKA6NI61 221 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 K7ERI5 159 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 NDUFS2O75306 463 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 CYP17A1P05093 508 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
LSM6-204ENST00000504181 TYMPP19971 482 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 GPR15P49685 360 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 CCT2P78371 535 aaKnown RBP13.56□□□□□ -0.24
LSM6-204ENST00000504181 WDR45BQ5MNZ6 344 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 PRICKLE2Q7Z3G6 844 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 C12orf40Q86WS4 652 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 SNIP1Q8TAD8 396 aaKnown RBP13.56□□□□□ -0.24
LSM6-204ENST00000504181 SPATA18Q8TC71 538 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 IFT74Q96LB3 600 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 AIFM3Q96NN9 605 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 TCHPQ9BT92 498 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 TMEM206Q9H813 350 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 PTPRHQ9HD43 1115 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 ABI2Q9NYB9 513 aaPredicted RBP13.56□□□□□ -0.24
LSM6-204ENST00000504181 PCDHA12Q9UN75 941 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 STK36Q9NRP7 1315 aa13.56□□□□□ -0.24
LSM6-204ENST00000504181 A0A1B0GTW7 788 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 PPEF2O14830 753 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 TNFSF14O43557 240 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 ZNF217O75362 1048 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 MCF2P10911 925 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 ODC1P11926 461 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 XRCC6P12956 609 aaKnown RBP eCLIP13.55□□□□□ -0.24
LSM6-204ENST00000504181 LRPAP1P30533 357 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 WASP42768 502 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 GUCY2FP51841 1108 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 RHDQ02161 417 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 RESTQ13127 1097 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 PTPRNQ16849 979 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 HLA-BQ31612 363 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 SLC10A6Q3KNW5 377 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 SDHAF4Q5VUM1 108 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 TMPRSS12Q86WS5 348 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 SPACA3Q8IXA5 215 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 ARL14EPQ8N8R7 260 aaPredicted RBP13.55□□□□□ -0.24
LSM6-204ENST00000504181 WBP1Q96G27 269 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 TARS2Q9BW92 718 aaKnown RBP13.55□□□□□ -0.24
LSM6-204ENST00000504181 ZCWPW1Q9H0M4 648 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 MIR1-1HGQ9H1L0 117 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 ARHGEF4Q9NR80 690 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 NXF1Q9UBU9 619 aaKnown RBP13.55□□□□□ -0.24
LSM6-204ENST00000504181 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 PHLPP2Q6ZVD8 1323 aa13.55□□□□□ -0.24
LSM6-204ENST00000504181 ANKRD17O75179 2603 aaKnown RBP13.55□□□□□ -0.24
LSM6-204ENST00000504181 MEI4A8MW99 385 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 CSH1P0DML2 217 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 CSH2P0DML3 217 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 HOXB2P14652 356 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 JUPP14923 745 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 NDUFV2P19404 249 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 HNF1BP35680 557 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms