RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SEZ6Q53EL9 994 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 EARS2Q5JPH6 523 aaKnown RBP3.98□□□□□ -1.77
USP46-205ENST00000504078 GPR158Q5T848 1215 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 CYP4A22Q5TCH4 519 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 DAB2IPQ5VWQ8 1189 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 Q6ZUG5 572 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 TICAM2Q86XR7 235 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 MFSD6LQ8IWD5 586 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 SFTPA1Q8IWL2 248 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 TPH2Q8IWU9 490 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 ALDH16A1Q8IZ83 802 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 ELMOD1Q8N336 334 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 TMTC2Q8N394 836 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 DEFB119Q8N690 84 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 FRMD1Q8N878 549 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 RDM1Q8NG50 284 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 CCDC12Q8WUD4 166 aaPredicted RBP3.98□□□□□ -1.77
USP46-205ENST00000504078 TCP11Q8WWU5 503 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 RLN3Q8WXF3 142 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 PIGKQ92643 395 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 JAKMIP1Q96N16 626 aaKnown RBP3.98□□□□□ -1.77
USP46-205ENST00000504078 GLT8D2Q9H1C3 349 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 DNAJC25Q9H1X3 360 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 ATXN3LQ9H3M9 355 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 EBF3Q9H4W6 596 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 FBRSL1Q9HCM7 1045 aaKnown RBP3.98□□□□□ -1.77
USP46-205ENST00000504078 SRA1Q9HD15 236 aaKnown RBP3.98□□□□□ -1.77
USP46-205ENST00000504078 HPS4Q9NQG7 708 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 TUBGCP4Q9UGJ1 667 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 FBXL5Q9UKA1 691 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 CCL26Q9Y258 94 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 ZFYVE26Q68DK2 2539 aa3.98□□□□□ -1.77
USP46-205ENST00000504078 TNRC6BQ9UPQ9 1833 aaKnown RBP3.98□□□□□ -1.77
USP46-205ENST00000504078 FREM2Q5SZK8 3169 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 OBSL1O75147 1896 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 BCLAF3A2AJT9 711 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 DBX1A6NMT0 343 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 TGFBR3LH3BV60 316 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 M0R2N6 131 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 CDX4O14627 284 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 ZNF197O14709 1029 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 PPEF2O14830 753 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 N4BP3O15049 544 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 CHADO15335 359 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 MARCH6O60337 910 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 CCNT1O60563 726 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 PAPSS2O95340 614 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 P4HBP07237 508 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 POU2F2P09086 479 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 GLB1P16278 677 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 JUNBP17275 347 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 GABRR2P28476 465 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 AXLP30530 894 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 CNR2P34972 360 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 GPR15P49685 360 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 IRX4P78413 519 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 CDC42EP1Q00587 391 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 NCBP1Q09161 790 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 PPP2R5CQ13362 524 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 PRPF4BQ13523 1007 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 DMC1Q14565 340 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 NECTIN1Q15223 517 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 NPY5RQ15761 445 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 CCDC142Q17RM4 750 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 ZNF568Q3ZCX4 644 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 TRIM61Q5EBN2 209 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 PERM1Q5SV97 790 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 PMS2CLQ68D20 193 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 IQCEQ6IPM2 695 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 ZNF280DQ6N043 979 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 FAM43BQ6ZT52 329 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 PIK3AP1Q6ZUJ8 805 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 ANKS3Q6ZW76 656 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 DHX32Q7L7V1 743 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 PROSER1Q86XN7 944 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 ARID3BQ8IVW6 561 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 ZBTB8OSQ8IWT0 167 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 TMEFF1Q8IYR6 380 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 BLIDQ8IZY5 108 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 DEPDC4Q8N2C3 294 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 CCDC33Q8N5R6 958 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 DEPTORQ8TB45 409 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 BICD2Q8TD16 824 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 GIPC2Q8TF65 315 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 EZH1Q92800 747 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 HAS1Q92839 578 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 ZNF512Q96ME7 567 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 YTHDC1Q96MU7 727 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 ZMAT2Q96NC0 199 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 PPP1R10Q96QC0 940 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 SEPT5Q99719 369 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 EIF2AK1Q9BQI3 630 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 ADPGKQ9BRR6 497 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 MTA3Q9BTC8 594 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 CDT1Q9H211 546 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 C8orf33Q9H7E9 229 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 MBD1Q9UIS9 605 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 PCDHA4Q9UN74 947 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms