RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 PRDM16Q9HAZ2 1276 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 PDE11AQ9HCR9 933 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 SCUBE2Q9NQ36 999 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 TRPV5Q9NQA5 729 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 GKN1Q9NS71 199 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 HOMER3Q9NSC5 361 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 TMEM74BQ9NUR3 256 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 WDR70Q9NW82 654 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 IFNKQ9P0W0 207 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 WRAP73Q9P2S5 460 aaPredicted RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 LCMT1Q9UIC8 334 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 SRPK3Q9UPE1 567 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 APOBEC2Q9Y235 224 aaKnown RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 GDAQ9Y2T3 454 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 IGF2RP11717 2491 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 KAT6AQ92794 2004 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 SMG1Q96Q15 3661 aaKnown RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 NBEAQ8NFP9 2946 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 ANO9A1A5B4 782 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 H3BQF6 201 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 LIN7AO14910 233 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 B4GALT5O43286 388 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 SLC28A2O43868 658 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 CCNT1O60563 726 aaKnown RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 TSPAN1O60635 241 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 PPP6R2O75170 966 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 MAFO75444 373 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 EFEMP2O95967 443 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 SERPINC1P01008 464 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 CAPNS1P04632 268 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 THP07101 528 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 CPB1P15086 417 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 ITPKAP23677 461 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 CMA1P23946 247 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 KRT2P35908 639 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 EIF2S3P41091 472 aaKnown RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 GALK1P51570 392 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 PSMC5P62195 406 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 CXADRP78310 365 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 SKOR1P84550 965 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 ROR1Q01973 937 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 SEMG2Q02383 582 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 TBX2Q13207 712 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 SEMA3BQ13214 749 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 NNTQ13423 1086 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 TAF12Q16514 161 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 FOXD4L6Q3SYB3 417 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 PREPLQ4J6C6 727 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 ARHGAP15Q53QZ3 475 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 WLSQ5T9L3 541 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 EMC10Q5UCC4 262 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 LYSMD4Q5XG99 296 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 NAIF1Q69YI7 327 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 FSTL4Q6MZW2 842 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 FOXD4L3Q6VB84 417 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 ANKS3Q6ZW76 656 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 MAEAQ7L5Y9 396 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 C4orf19Q8IY42 314 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 DIS3L2Q8IYB7 885 aaKnown RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 RGL4Q8IZJ4 473 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 MINDY1Q8N5J2 469 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 FRMD1Q8N878 549 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 GPATCH11Q8N954 259 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 FSIP1Q8NA03 581 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 ZNF579Q8NAF0 562 aaKnown RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 MLKLQ8NB16 471 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 SPATA18Q8TC71 538 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 CCHCR1Q8TD31 782 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 BPIFB1Q8TDL5 484 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 COG1Q8WTW3 980 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 E2F7Q96AV8 911 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 CHFRQ96EP1 664 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 SPACA7Q96KW9 195 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 NAPGQ99747 312 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 JPH2Q9BR39 696 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 TRIM4Q9C037 500 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 CSRNP2Q9H175 543 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 FAM204AQ9H8W3 233 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 GOLGA2P5Q9HBQ8 144 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 FBRSL1Q9HCM7 1045 aaKnown RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 POLMQ9NP87 494 aaPredicted RBP5.54□□□□□ -1.52
HTT-202ENST00000502820 CEP72Q9P209 647 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 MTRRQ9UBK8 725 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 MYO6Q9UM54 1294 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 INSL5Q9Y5Q6 135 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 AK5Q9Y6K8 562 aa5.54□□□□□ -1.52
HTT-202ENST00000502820 ASH1LQ9NR48 2969 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 CEP295Q9C0D2 2601 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 ADAMTS20P59510 1910 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 BTBD18B2RXH4 712 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 H0YHG0 523 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 TK2O00142 265 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 ARNTLO00327 626 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 EIF3HO15372 352 aaKnown RBP eCLIP5.53□□□□□ -1.52
HTT-202ENST00000502820 RRP8O43159 456 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 TRAPPC3O43617 180 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 MARCH6O60337 910 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 PRPF6O94906 941 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 SEC31AO94979 1220 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 LYPLA2O95372 231 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms