RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 ALDH1A2O94788 518 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 ITPKAP23677 461 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 RDXP35241 583 aaKnown RBP9.82□□□□□ -0.84
CCDC171-209ENST00000498725 OPRD1P41143 372 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 SLC6A11P48066 632 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 NCKAP1LP55160 1127 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 TSPY1Q01534 308 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 KDSRQ06136 332 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 USP4Q13107 963 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 ZNF268Q14587 947 aaPredicted RBP9.82□□□□□ -0.84
CCDC171-209ENST00000498725 KCNB1Q14721 858 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 CRY1Q16526 586 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 KYAT1Q16773 422 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 EMC10Q5UCC4 262 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 DTHD1Q6ZMT9 781 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 PDZD3Q86UT5 571 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 RASSF3Q86WH2 238 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 SYT12Q8IV01 421 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 MYCT1Q8N699 235 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 TXNDC5Q8NBS9 432 aaKnown RBP9.82□□□□□ -0.84
CCDC171-209ENST00000498725 CDK5RAP3Q96JB5 506 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 CAMK1GQ96NX5 476 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 PNMA5Q96PV4 448 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 FNBP1Q96RU3 617 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 TIPINQ9BVW5 301 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 LARSQ9P2J5 1176 aaKnown RBP9.82□□□□□ -0.84
CCDC171-209ENST00000498725 EVLQ9UI08 416 aaPredicted RBP9.82□□□□□ -0.84
CCDC171-209ENST00000498725 CPSF3Q9UKF6 684 aaKnown RBP9.82□□□□□ -0.84
CCDC171-209ENST00000498725 PLXNB3Q9ULL4 1909 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 PKD1L2Q7Z442 2459 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 DMXL2Q8TDJ6 3036 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 KPNA7A9QM74 516 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 SGK1O00141 431 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 HCRTO43612 131 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 FAM13AO94988 1023 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 NFATC1O95644 943 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 PLA2G4BP0C869 781 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 HDCP19113 662 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 P2RY2P41231 377 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 TOB1P50616 345 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-209ENST00000498725 RPL10AP62906 217 aaKnown RBP9.81□□□□□ -0.84
CCDC171-209ENST00000498725 MESP2Q0VG99 397 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 SCAPQ12770 1279 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 SEMA3BQ13214 749 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 SV2CQ496J9 727 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 SOWAHCQ53LP3 525 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-209ENST00000498725 LYSMD4Q5XG99 296 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 SLC39A4Q6P5W5 647 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 PIP4P1Q86T03 277 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 PROSER1Q86XN7 944 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 PNPLA1Q8N8W4 532 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 SYT2Q8N9I0 419 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-209ENST00000498725 LRRC15Q8TF66 581 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 HNRNPLLQ8WVV9 542 aaKnown RBP9.81□□□□□ -0.84
CCDC171-209ENST00000498725 IKZF4Q9H2S9 585 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 TMEM206Q9H813 350 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 UXTQ9UBK9 157 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-209ENST00000498725 GTF3C4Q9UKN8 822 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-209ENST00000498725 ITPR1Q14643 2758 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 PTPRBP23467 1997 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 PCDH15Q96QU1 1955 aa9.81□□□□□ -0.84
CCDC171-209ENST00000498725 PCNX2A6NKB5 2137 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 A0A0B4J269 797 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 TCRBV21S2A2A0A5A6 115 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 H0YCG3 227 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 TNFRSF10BO14763 440 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 OPHN1O60890 802 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 ABL1P00519 1130 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 KRT18P05783 430 aaKnown RBP9.8□□□□□ -0.84
CCDC171-209ENST00000498725 ADRB2P07550 413 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 PAX3P23760 479 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 WASP42768 502 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 SLC12A3P55017 1021 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 RPL6Q02878 288 aaKnown RBP9.8□□□□□ -0.84
CCDC171-209ENST00000498725 GFPT1Q06210 699 aaPredicted RBP9.8□□□□□ -0.84
CCDC171-209ENST00000498725 SMARCB1Q12824 385 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 ARSHQ5FYA8 562 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 ADALQ6DHV7 355 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 FILIP1Q7Z7B0 1213 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 GPBP1Q86WP2 473 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 SPATA2LQ8IUW3 424 aaPredicted RBP9.8□□□□□ -0.84
CCDC171-209ENST00000498725 CD302Q8IX05 232 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 MINDY1Q8N5J2 469 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 FSIP1Q8NA03 581 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 IL17RCQ8NAC3 791 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 FAM184AQ8NB25 1140 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 CCDC26Q8TAB7 109 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 OLIG1Q8TAK6 271 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 WHAMMQ8TF30 809 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 NOC3LQ8WTT2 800 aaKnown RBP9.8□□□□□ -0.84
CCDC171-209ENST00000498725 FAM84AQ96KN4 292 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 REEP2Q9BRK0 252 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 POLMQ9NP87 494 aaPredicted RBP9.8□□□□□ -0.84
CCDC171-209ENST00000498725 DDX43Q9NXZ2 648 aaKnown RBP9.8□□□□□ -0.84
CCDC171-209ENST00000498725 KCNG1Q9UIX4 513 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 SLC6A14Q9UN76 642 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 AGAP1Q9UPQ3 857 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 GPSM3Q9Y4H4 160 aa9.8□□□□□ -0.84
CCDC171-209ENST00000498725 PCDHB9Q9Y5E1 797 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms