RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 KCT2Q8NC54 265 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 CCDC197Q8NCU1 140 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 HOOK2Q96ED9 719 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 AP1M1Q9BXS5 423 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 LRRC19Q9H756 370 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 ERVK-5Q9HDB9 667 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 ARHGEF3Q9NR81 526 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 HAUS2Q9NVX0 235 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 KCND2Q9NZV8 630 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 SEL1LQ9UBV2 794 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 AMACRQ9UHK6 382 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 LGALS13Q9UHV8 139 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 COG5Q9UP83 839 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 STARD13Q9Y3M8 1113 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 IGSF9BQ9UPX0 1349 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 IGLV3-22A0A075B6J6 115 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CCDC189A1A4V9 331 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 O00370 1275 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 TMPRSS2O15393 492 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 AKAP10O43572 662 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 SNX3O60493 162 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 LILRB5O75023 590 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 FOSP01100 380 aaPredicted RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 GZMAP12544 262 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CHN1P15882 459 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 IVDP26440 423 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 FMO5P49326 533 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 SNRPFP62306 86 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 PSMC6P62333 389 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 PPP2R5CQ13362 524 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CTTNQ14247 550 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 HLTFQ14527 1009 aaKnown RBP eCLIP4.17□□□□□ -1.74
CLTC-209ENST00000498711 PCBP1Q15365 356 aaKnown RBP eCLIP4.17□□□□□ -1.74
CLTC-209ENST00000498711 UBE2SQ16763 222 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 RGS9BPQ6ZS82 235 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 LHFPL2Q6ZUX7 228 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 SYDE1Q6ZW31 735 aaPredicted RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 TRMT10CQ7L0Y3 403 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 SFR1Q86XK3 245 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 GMCL1P1Q8NEA9 526 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 BAHD1Q8TBE0 780 aaPredicted RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 KCNN1Q92952 543 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 MRGPRX3Q96LB0 322 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CCDC17Q96LX7 622 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CCDC114Q96M63 670 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 FMO2Q99518 471 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 TTC1Q99614 292 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 REEP2Q9BRK0 252 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.17□□□□□ -1.74
CLTC-209ENST00000498711 ANO3Q9BYT9 981 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 WNT8AQ9H1J5 351 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 PSTPIP2Q9H939 334 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 PPANQ9NQ55 473 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 BATF3Q9NR55 127 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 SAP30BPQ9UHR5 308 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 STX8Q9UNK0 236 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 DAGLAQ9Y4D2 1042 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CEP83Q9Y592 693 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 ACTL7BQ9Y614 415 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 RIPK2O43353 540 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 KPNA6O60684 536 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 DLGAP3O95886 979 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CCNB1P14635 433 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CHRNB2P17787 502 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 GCKP35557 465 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 PSMC2P35998 433 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 CASP4P49662 377 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 NCALDP61601 193 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 DR1Q01658 176 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 PTP4A2Q12974 167 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 ZNF460Q14592 562 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 SETDB1Q15047 1291 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 SEPT7Q16181 437 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 NKG7Q16617 165 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 EPC2Q52LR7 807 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 ANKRD39Q53RE8 183 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 C1orf220Q5T0J3 134 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 RNF43Q68DV7 783 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 RINT1Q6NUQ1 792 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 TATDN1Q6P1N9 297 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 TTC27Q6P3X3 843 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 HHIPL2Q6UWX4 724 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 ZNF720Q7Z2F6 126 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 FGD2Q7Z6J4 655 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 VPS36Q86VN1 386 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 NELFCDQ8IXH7 590 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 LRRC34Q8IZ02 419 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CKAP2Q8WWK9 683 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 PSPC1Q8WXF1 523 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 ALG3Q92685 438 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 SLC5A5Q92911 643 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 PTPRN2Q92932 1015 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 ARHGEF26Q96DR7 871 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 RCC1LQ96I51 464 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 SERPINB12Q96P63 405 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 AGPAT1Q99943 283 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 CELF4Q9BZC1 486 aaKnown RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 CDH19Q9H159 772 aa4.17□□□□□ -1.74
CLTC-209ENST00000498711 TMX4Q9H1E5 349 aaPredicted RBP4.17□□□□□ -1.74
CLTC-209ENST00000498711 ST6GALNAC4Q9H4F1 302 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms