RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 FDFT1P37268 417 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 GJA8P48165 433 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 BASP1P80723 227 aaKnown RBP13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 SMAD1Q15797 465 aaKnown RBP13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 MSS51Q4VC12 460 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 ASPRV1Q53RT3 343 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 TMCO4Q5TGY1 634 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 ANKRD22Q5VYY1 191 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 STXBP4Q6ZWJ1 553 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 LMO3Q8TAP4 145 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 SENP7Q9BQF6 1050 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 PCDH18Q9HCL0 1135 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 INIPQ9NRY2 104 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 CLUHO75153 1309 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 A0A1B0GTW7 788 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 F5H6K3 240 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 TBC1D12O60347 775 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 GAP43P17677 238 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 NCF2P19878 526 aaPredicted RBP13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 KLRC2P26717 231 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 OASLQ15646 514 aaKnown RBP13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 BMT2Q1RMZ1 405 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 DEFB107AQ8IZN7 70 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 HOMER2Q9NSB8 354 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 UBAP1Q9NZ09 502 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 PLA2G4CQ9UP65 541 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 A0A088AWK7 358 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 TMEM221A6NGB7 291 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 HSPA1LP34931 641 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 C6orf52Q5T4I8 152 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ACAD10Q6JQN1 1059 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 CRLF3Q8IUI8 442 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ZNF276Q8N554 614 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 PPM1NQ8N819 430 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 TOPORSQ9NS56 1045 aaPredicted RBP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 DENND3A2RUS2 1198 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 FAM86B1E9PN63 330 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 FAM86B2P0C5J1 330 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ZFXP17010 805 aaPredicted RBP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 NSFP46459 744 aaKnown RBP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ALDH1A3P47895 512 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 MFAP3P55082 362 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 TBL3Q12788 808 aaKnown RBP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 BMPR2Q13873 1038 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 FAM98CQ17RN3 349 aaKnown RBP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 FNBP1LQ5T0N5 605 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 NUDCD3Q8IVD9 361 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 E2F7Q96AV8 911 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 CFAP36Q96G28 342 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 DCUN1D1Q96GG9 259 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 TRIM56Q9BRZ2 755 aaKnown RBP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 GPAMQ9HCL2 828 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 RAB20Q9NX57 234 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 HEY1Q9Y5J3 304 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 hCG_1984214I3L0E3 225 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ZBTB5O15062 677 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 PLSCR1O15162 318 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ENTPD1P49961 510 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 EMP3P54852 163 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 SULT2A1Q06520 285 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 QRICH1Q2TAL8 776 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 EFHC2Q5JST6 749 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 TPTE2Q6XPS3 522 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 CDHR3Q6ZTQ4 885 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ARMCX6Q7L4S7 300 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ZNF720Q7Z2F6 126 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 RHOT1Q8IXI2 618 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ZNF713Q8N859 430 aaPredicted RBP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 RNF169Q8NCN4 708 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 Q9H521 79 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ARMC7Q9H6L4 198 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ZBTB21Q9ULJ3 1066 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 DMTF1Q9Y222 760 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 AP4B1Q9Y6B7 739 aa13.64□□□□□ -0.23
GAPVD1-220ENST00000497580 ALOX15BO15296 676 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 TCF4P15884 667 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 ZNF24P17028 368 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 SLC18A1P54219 525 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 GTF2IP78347 998 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 CCNIQ14094 377 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 RIN3Q8TB24 985 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 MMP19Q99542 508 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 POLR3CQ9BUI4 534 aaPredicted RBP13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 SELENONQ9NZV5 590 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 TBC1D30Q9Y2I9 924 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 TRIM49D1C9J1S8 452 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 ADCY6O43306 1168 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 MTA2O94776 668 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 NRLP54845 237 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 NFX1Q12986 1120 aaKnown RBP13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 HNRNPDQ14103 355 aaKnown RBP13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 KLHL38Q2WGJ6 581 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 ITPRIPL1Q6GPH6 555 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms