RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 VCPIP1Q96JH7 1222 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 NOX5Q96PH1 765 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 CERS4Q9HA82 394 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 DMAP1Q9NPF5 467 aaPredicted RBP20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 EHD2Q9NZN4 543 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 ASB3Q9Y575 518 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 SOX1O00570 391 aaPredicted RBP20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 TGM5O43548 720 aa20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 MICAL2O94851 1124 aa20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 VNN2O95498 520 aa20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 CHRNB2P17787 502 aa20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 RPL17P18621 184 aaKnown RBP20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 ACADSBP45954 432 aa20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 CYP27A1Q02318 531 aa20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 C10orf76Q5T2E6 689 aa20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 ZNF571Q7Z3V5 609 aaPredicted RBP20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 LRRC8AQ8IWT6 810 aa20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 TLE6Q9H808 572 aa20.89■□□□□ 0.93
SCAMP3-209ENST00000497470 PTPRDP23468 1912 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 LCA5LO95447 670 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 HNRNPA1P09651 372 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 OR4Q2P0C623 313 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 UNGP13051 313 aaPredicted RBP20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 CCDC130P13994 396 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 TNFAIP3P21580 790 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 ARID5AQ03989 594 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 ADCY1Q08828 1119 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 GRIN2CQ14957 1233 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 COL19A1Q14993 1142 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 SLC18A3Q16572 532 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 TDRD12Q587J7 1177 aaKnown RBP20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 CLEC20AQ6ZU45 233 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 TTC30AQ86WT1 665 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 ATAD1Q8NBU5 361 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 MSANTD4Q8NCY6 345 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 OLIG1Q8TAK6 271 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 CCDC42Q96M95 316 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 BAG1Q99933 345 aaPredicted RBP20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 FAM49BQ9NUQ9 324 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 DZANK1Q9NVP4 752 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 ZDHHC7Q9NXF8 308 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 IL37Q9NZH6 218 aa20.88■□□□□ 0.93
SCAMP3-209ENST00000497470 COL4A4P53420 1690 aaPredicted RBP20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 AP1G2O75843 785 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 MMEP08473 750 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 BDNFP23560 247 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 CYLC1P35663 651 aaPredicted RBP20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 NOMO3P69849 1222 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 CENPCQ03188 943 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 ORC1Q13415 861 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 GOLGA7BQ2TAP0 167 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 RAB41Q5JT25 222 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 TMEM110Q86TL2 294 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 TMEM139Q8IV31 216 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 EFHBQ8N7U6 833 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 KREMEN2Q8NCW0 462 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 CMASQ8NFW8 434 aaPredicted RBP20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 MED10Q9BTT4 135 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 SLC4A5Q9BY07 1137 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 PDCL3Q9H2J4 239 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 NHEJ1Q9H9Q4 299 aaPredicted RBP20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 ACP6Q9NPH0 428 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 KRT82Q9NSB4 513 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 ABI2Q9NYB9 513 aaPredicted RBP20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 NENFQ9UMX5 172 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 MTCH2Q9Y6C9 303 aa20.87■□□□□ 0.93
SCAMP3-209ENST00000497470 FAM92AA1XBS5 289 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 SRGAP2BP0DMP2 458 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 SCNN1AP37088 669 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 GABRB2P47870 512 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 ARPP19P56211 112 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 GSCP56915 257 aaPredicted RBP20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 DUSP4Q13115 394 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 CLEC16AQ2KHT3 1053 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 PHF13Q86YI8 300 aaPredicted RBP20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 ZDHHC17Q8IUH5 632 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 SLC20A1Q8WUM9 679 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 CASP10Q92851 521 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 GAS2L1Q99501 681 aaPredicted RBP20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 SMOQ99835 787 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 ISCUQ9H1K1 167 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 PRDM12Q9H4Q4 367 aa20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 MTCL1Q9Y4B5 1905 aaKnown RBP20.86■□□□□ 0.93
SCAMP3-209ENST00000497470 CHD9Q3L8U1 2897 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 HHLA1C9JL84 531 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 M0QYV0 167 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 CLDN5O00501 218 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 DDX3XO00571 662 aaKnown RBP eCLIP20.85■□□□□ 0.934e-11■■■■□ 20.8
SCAMP3-209ENST00000497470 ARHGAP6O43182 974 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 RTN2O75298 545 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 ZMYND10O75800 440 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 RTN3O95197 1032 aaPredicted RBP20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 SKILP12757 684 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 CYP2F1P24903 491 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 ADORA2BP29275 332 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 EIF4A3P38919 411 aaKnown RBP20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 ALDH1A3P47895 512 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 PDE4CQ08493 712 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 LIN9Q5TKA1 542 aa20.85■□□□□ 0.93
SCAMP3-209ENST00000497470 GLYCTKQ8IVS8 523 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms