RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	PCSK9	Q8NBP7	692 aa	Known RBP	3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	DENND1A	Q8TEH3	1009 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	SOCS4	Q8WXH5	440 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	R3HDM4	Q96D70	268 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	MVB12A	Q96EY5	273 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	SLC35A4	Q96G79	324 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	MRGPRX1	Q96LB2	322 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	LENG8	Q96PV6	779 aa	Predicted RBP	3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	GLOD4	Q9HC38	313 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	TCF7L1	Q9HCS4	588 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	ANLN	Q9NQW6	1124 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	TYW1	Q9NV66	732 aa	Known RBP	3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	DDX56	Q9NY93	547 aa	Known RBP	3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	XPR1	Q9UBH6	696 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	MRPS17	Q9Y2R5	130 aa	Known RBP	3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	PLEKHM1	Q9Y4G2	1056 aa		3.17	□□□□□ -1.9
RAD50-208	ENST00000496204	TCRBV5S1A1T	A0A578	114 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	DTNB	O60941	627 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	SNUPN	O95149	360 aa	Known RBP	3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	PDE8B	O95263	885 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	GRP	P07492	148 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	NPS	P0C0P6	89 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	AKAP5	P24588	427 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	ARHGAP25	P42331	645 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	PDE1A	P54750	535 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	MYO1E	Q12965	1108 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	E2F2	Q14209	437 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	CYP1B1	Q16678	543 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	PLEKHG6	Q3KR16	790 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	AMOT	Q4VCS5	1084 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	ATAT1	Q5SQI0	421 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	LAYN	Q6UX15	382 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	KRT73	Q86Y46	540 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	LRRC71	Q8N4P6	559 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	BRIX1	Q8TDN6	353 aa	Known RBP	3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	HPS3	Q969F9	1004 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	HSPBAP1	Q96EW2	488 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	MESP1	Q9BRJ9	268 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	TMEM79	Q9BSE2	394 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	WAC	Q9BTA9	647 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	VPS16	Q9H269	839 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	CXorf36	Q9H7Y0	433 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	TUBA8	Q9NY65	449 aa	Predicted RBP	3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	TBC1D30	Q9Y2I9	924 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	MED16	Q9Y2X0	877 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204	WDR17	Q8IZU2	1322 aa		3.16	□□□□□ -1.9
RAD50-208	ENST00000496204		E5RJQ4	531 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	MARCH6	O60337	910 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	PDGFRB	P09619	1106 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	CYP2A6	P11509	494 aa	Predicted RBP	3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	FPR3	P25089	353 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	ADORA2A	P29274	412 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	SLC11A2	P49281	568 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	UCP3	P55916	312 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	LY6K	Q17RY6	165 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204		Q4G0T1	1027 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	BRDT	Q58F21	947 aa	Predicted RBP	3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	RNASE12	Q5GAN4	147 aa	Known RBP	3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	KHDC1L	Q5JSQ8	128 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	TERB1	Q8NA31	727 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	XAGE5	Q8WWM1	108 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	SNX18	Q96RF0	628 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	CGRRF1	Q99675	332 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	KRTAP2-2	Q9BYT5	123 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	SLC12A5	Q9H2X9	1139 aa		3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	LUC7L2	Q9Y383	392 aa	Known RBP	3.15	□□□□□ -1.91
RAD50-208	ENST00000496204	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	3.15	□□□□□ -1.91
RAD50-208	ENST00000496204		A0A088AWK7	358 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	POC1B-GALNT4	F8VUJ3	575 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	FCHO1	O14526	889 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	IKBKB	O14920	756 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	VNN1	O95497	513 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	IL33	O95760	270 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	KCNA3	P22001	575 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	ATP5F1	P24539	256 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	DGKE	P52429	567 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	ARFIP2	P53365	341 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	LAMB3	Q13751	1172 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	RABEP1	Q15276	862 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	DEPDC1	Q5TB30	811 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	ZNF517	Q6ZMY9	492 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	ABRA	Q8N0Z2	381 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	GALNT4	Q8N4A0	578 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	ABHD11	Q8NFV4	315 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	ZNF398	Q8TD17	642 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	WASF1	Q92558	559 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	CHMP4C	Q96CF2	233 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	DAZAP1	Q96EP5	407 aa	Known RBP	3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	CDK5RAP3	Q96JB5	506 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	NUP88	Q99567	741 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	P2RX7	Q99572	595 aa	Known RBP	3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	ARMT1	Q9H993	441 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	ASIC5	Q9NY37	505 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	KLHL42	Q9P2K6	505 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	SCAF8	Q9UPN6	1271 aa	Known RBP	3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	SHOC2	Q9UQ13	582 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	STXBP5L	Q9Y2K9	1186 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	AFG3L2	Q9Y4W6	797 aa		3.14	□□□□□ -1.91
RAD50-208	ENST00000496204	SNX14	Q9Y5W7	946 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms