RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-208ENST00000496204 AEBP2Q6ZN18 517 aaPredicted RBP18.25■□□□□ 0.51
RAD50-208ENST00000496204 CHIC1Q5VXU3 224 aa17.42■□□□□ 0.38
RAD50-208ENST00000496204 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
RAD50-208ENST00000496204 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
RAD50-208ENST00000496204 FOXD1Q16676 465 aa14.43□□□□□ -0.1
RAD50-208ENST00000496204 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
RAD50-208ENST00000496204 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
RAD50-208ENST00000496204 ADRA2BP18089 450 aa13.58□□□□□ -0.24
RAD50-208ENST00000496204 PIAS4Q8N2W9 510 aaPredicted RBP13.47□□□□□ -0.25
RAD50-208ENST00000496204 MSH5O43196 834 aa13.38□□□□□ -0.27
RAD50-208ENST00000496204 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
RAD50-208ENST00000496204 MAPK8IP2Q13387 824 aaPredicted RBP12.45□□□□□ -0.42
RAD50-208ENST00000496204 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
RAD50-208ENST00000496204 DMRT2Q9Y5R5 561 aa12.31□□□□□ -0.44
RAD50-208ENST00000496204 PPP4R3CPQ6ZMV5 832 aa12.27□□□□□ -0.45
RAD50-208ENST00000496204 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
RAD50-208ENST00000496204 HOXD11P31277 338 aaPredicted RBP11.93□□□□□ -0.5
RAD50-208ENST00000496204 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
RAD50-208ENST00000496204 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
RAD50-208ENST00000496204 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
RAD50-208ENST00000496204 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
RAD50-208ENST00000496204 KCNA4P22459 653 aa11.6□□□□□ -0.55
RAD50-208ENST00000496204 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
RAD50-208ENST00000496204 DNAJC5BQ9UF47 199 aa11.48□□□□□ -0.57
RAD50-208ENST00000496204 CACNB1Q02641 598 aaPredicted RBP11.38□□□□□ -0.59
RAD50-208ENST00000496204 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
RAD50-208ENST00000496204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.29□□□□□ -0.6
RAD50-208ENST00000496204 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
RAD50-208ENST00000496204 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
RAD50-208ENST00000496204 SLC4A1APQ9BWU0 796 aaKnown RBP10.93□□□□□ -0.66
RAD50-208ENST00000496204 SPINK5Q9NQ38 1064 aaPredicted RBP10.93□□□□□ -0.66
RAD50-208ENST00000496204 CAPN15O75808 1086 aa10.83□□□□□ -0.68
RAD50-208ENST00000496204 DSG3P32926 999 aa10.81□□□□□ -0.68
RAD50-208ENST00000496204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.78□□□□□ -0.68
RAD50-208ENST00000496204 HNRNPUL2Q1KMD3 747 aaKnown RBP10.78□□□□□ -0.68
RAD50-208ENST00000496204 MYCNP04198 464 aaPredicted RBP10.75□□□□□ -0.69
RAD50-208ENST00000496204 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
RAD50-208ENST00000496204 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
RAD50-208ENST00000496204 ZBTB22O15209 634 aa10.72□□□□□ -0.69
RAD50-208ENST00000496204 APLP2Q06481 763 aa10.71□□□□□ -0.69
RAD50-208ENST00000496204 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
RAD50-208ENST00000496204 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
RAD50-208ENST00000496204 ABCB7O75027 752 aa10.63□□□□□ -0.71
RAD50-208ENST00000496204 ATF5Q9Y2D1 282 aaPredicted RBP10.59□□□□□ -0.71
RAD50-208ENST00000496204 POLA2Q14181 598 aa10.49□□□□□ -0.73
RAD50-208ENST00000496204 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
RAD50-208ENST00000496204 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
RAD50-208ENST00000496204 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
RAD50-208ENST00000496204 ZBTB12Q9Y330 459 aaPredicted RBP10.22□□□□□ -0.77
RAD50-208ENST00000496204 EHMT2Q96KQ7 1210 aa10.21□□□□□ -0.77
RAD50-208ENST00000496204 OSCARQ8IYS5 282 aa10.15□□□□□ -0.78
RAD50-208ENST00000496204 MKRN4PQ13434 485 aaPredicted RBP10.1□□□□□ -0.79
RAD50-208ENST00000496204 POTEHQ6S545 545 aa10.09□□□□□ -0.79
RAD50-208ENST00000496204 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
RAD50-208ENST00000496204 FBLN2P98095 1184 aa10.03□□□□□ -0.8
RAD50-208ENST00000496204 CHRDL2Q6WN34 429 aa9.99□□□□□ -0.81
RAD50-208ENST00000496204 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
RAD50-208ENST00000496204 SPDYE2BA6NHP3 402 aa9.96□□□□□ -0.82
RAD50-208ENST00000496204 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
RAD50-208ENST00000496204 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
RAD50-208ENST00000496204 SSUH2Q9Y2M2 353 aa9.89□□□□□ -0.83
RAD50-208ENST00000496204 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
RAD50-208ENST00000496204 ZNF692Q9BU19 519 aaPredicted RBP9.85□□□□□ -0.83
RAD50-208ENST00000496204 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
RAD50-208ENST00000496204 FXR2P51116 673 aaKnown RBP eCLIP9.79□□□□□ -0.84
RAD50-208ENST00000496204 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
RAD50-208ENST00000496204 SPDYE1Q8NFV5 336 aaPredicted RBP9.73□□□□□ -0.85
RAD50-208ENST00000496204 CLEC11AQ9Y240 323 aa9.69□□□□□ -0.86
RAD50-208ENST00000496204 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
RAD50-208ENST00000496204 PRKAR2AP13861 404 aaKnown RBP9.6□□□□□ -0.87
RAD50-208ENST00000496204 PRR29P0C7W0 189 aa9.57□□□□□ -0.88
RAD50-208ENST00000496204 CHADLQ6NUI6 762 aa9.55□□□□□ -0.88
RAD50-208ENST00000496204 HAX1O00165 279 aa9.54□□□□□ -0.88
RAD50-208ENST00000496204 EVX2Q03828 476 aa9.53□□□□□ -0.88
RAD50-208ENST00000496204 SP7Q8TDD2 431 aaPredicted RBP9.52□□□□□ -0.89
RAD50-208ENST00000496204 PROM2Q8N271 834 aa9.5□□□□□ -0.89
RAD50-208ENST00000496204 C19orf67A6NJJ6 358 aa9.46□□□□□ -0.9
RAD50-208ENST00000496204 STAG3Q9UJ98 1225 aa9.45□□□□□ -0.9
RAD50-208ENST00000496204 CREBZFQ9NS37 354 aa9.43□□□□□ -0.9
RAD50-208ENST00000496204 FARP1Q9Y4F1 1045 aaPredicted RBP9.42□□□□□ -0.9
RAD50-208ENST00000496204 MNX1P50219 401 aaPredicted RBP9.32□□□□□ -0.92
RAD50-208ENST00000496204 CD44P16070 742 aaKnown RBP9.3□□□□□ -0.92
RAD50-208ENST00000496204 FKBP8Q14318 412 aa9.3□□□□□ -0.92
RAD50-208ENST00000496204 GABBR2O75899 941 aa9.28□□□□□ -0.92
RAD50-208ENST00000496204 ZRANB1Q9UGI0 708 aa9.19□□□□□ -0.94
RAD50-208ENST00000496204 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
RAD50-208ENST00000496204 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
RAD50-208ENST00000496204 MIER1Q8N108 512 aa9.14□□□□□ -0.95
RAD50-208ENST00000496204 POTEIP0CG38 1075 aa9.13□□□□□ -0.95
RAD50-208ENST00000496204 CLCN6P51797 869 aa9.12□□□□□ -0.95
RAD50-208ENST00000496204 PHF12Q96QT6 1004 aa9.1□□□□□ -0.95
RAD50-208ENST00000496204 GALR2O43603 387 aaPredicted RBP9.08□□□□□ -0.96
RAD50-208ENST00000496204 PAK3O75914 559 aaPredicted RBP9.08□□□□□ -0.96
RAD50-208ENST00000496204 PLCD3Q8N3E9 789 aa9.07□□□□□ -0.96
RAD50-208ENST00000496204 RASEFQ8IZ41 740 aa9.05□□□□□ -0.96
RAD50-208ENST00000496204 PLEKHG5O94827 1062 aa9.04□□□□□ -0.96
RAD50-208ENST00000496204 TSPYL2Q9H2G4 693 aaPredicted RBP9.04□□□□□ -0.96
RAD50-208ENST00000496204 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
RAD50-208ENST00000496204 NUBP1P53384 320 aa9.02□□□□□ -0.97
RAD50-208ENST00000496204 FBXO3Q9UK99 471 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms