RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 LMNB2Q03252 620 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 FAM160A1Q05DH4 1040 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 MTF1Q14872 753 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 LIMS2Q7Z4I7 341 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 LONP2Q86WA8 852 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 XXYLT1Q8NBI6 393 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 SCFD1Q8WVM8 642 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 CGRRF1Q99675 332 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 BLZF1Q9H2G9 400 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 CACNA1AO00555 2505 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 F13A1P00488 732 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 SDHBP21912 280 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 ANXA13P27216 316 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 CASP1P29466 404 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 GRIK1P39086 918 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 CYP24A1Q07973 514 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 PSMD6Q15008 389 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 TMEM196Q5HYL7 178 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 VSTM1Q6UX27 236 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 RIN3Q8TB24 985 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 SNX25Q9H3E2 840 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 CRTAC1Q9NQ79 661 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 C2orf42Q9NWW7 574 aa19.69■□□□□ 0.74
CLCNKA-207ENST00000495784 OTOL1A6NHN0 477 aaPredicted RBP19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 PRR5-ARHGAP8B1AHC4 643 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 TRDMT1O14717 391 aaKnown RBP19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 HRO43593 1189 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 BDNFP23560 247 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 GNL1P36915 607 aaPredicted RBP19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 AFMP43652 599 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 TNNC1P63316 161 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 ARHGAP8P85298 464 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 EHHADHQ08426 723 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 SRSF5Q13243 272 aaKnown RBP19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 KCNB1Q14721 858 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 FSTL4Q6MZW2 842 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 CPA6Q8N4T0 437 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 EXOC4Q96A65 974 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 SPATA17Q96L03 361 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 SLC22A12Q96S37 553 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 CYP2S1Q96SQ9 504 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 SLC39A2Q9NP94 309 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 DUS2Q9NX74 493 aaKnown RBP19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 PCDHA7Q9UN72 937 aa19.68■□□□□ 0.74
CLCNKA-207ENST00000495784 PVALEFA0A1B0GWK0 134 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 ATG13O75143 517 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 CST3P01034 146 aaPredicted RBP19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 RETP07949 1114 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 HOXA6P31267 233 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 IFNAR2P48551 515 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 PDE6CP51160 858 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 SPEM2Q0P670 501 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 TRPC3Q13507 836 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 ZNF77Q15935 545 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 RESP18Q5W5W9 173 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 ATL3Q6DD88 541 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 CEP68Q76N32 757 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 CEP57L1Q8IYX8 460 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 ARL14EPQ8N8R7 260 aaPredicted RBP19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 OR6B3Q8NGW1 331 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 MYCBPAPQ8TBZ2 947 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 PCED1BQ96HM7 432 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 CEP295NLQ96MC4 621 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 MRPL45Q9BRJ2 306 aaKnown RBP19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 PARD6AQ9NPB6 346 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 EHD2Q9NZN4 543 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 CGNQ9P2M7 1197 aaKnown RBP19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 CDV3Q9UKY7 258 aaKnown RBP19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 CFAP45Q9UL16 551 aa19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 KIF26AQ9ULI4 1882 aaPredicted RBP19.67■□□□□ 0.74
CLCNKA-207ENST00000495784 DENND4CQ5VZ89 1909 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 C2orf78A6NCI8 922 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 TRIM66O15016 1216 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 EXOC3O60645 756 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 TACC1O75410 805 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 CLSTN1O94985 981 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 HDCP19113 662 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 TGM1P22735 817 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 USP4Q13107 963 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 CUL4BQ13620 913 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 BMT2Q1RMZ1 405 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 WDR72Q3MJ13 1102 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 MDH1BQ5I0G3 518 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 DENND5BQ6ZUT9 1274 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 C12orf56Q8IXR9 622 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 SH3RF2Q8TEC5 729 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 OSCP1Q8WVF1 389 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 ATP2A3Q93084 1043 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 CHFRQ96EP1 664 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 P2RY13Q9BPV8 354 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 ECT2Q9H8V3 914 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 TRPM5Q9NZQ8 1165 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 GCNT4Q9P109 453 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 SLC8A2Q9UPR5 921 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 WNT6Q9Y6F9 365 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 OBSL1O75147 1896 aa19.66■□□□□ 0.74
CLCNKA-207ENST00000495784 ZNF638Q14966 1978 aaKnown RBP19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 MED19A0JLT2 244 aaPredicted RBP19.65■□□□□ 0.74
CLCNKA-207ENST00000495784 PHACTR2O75167 634 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms