RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 HNRNPH1P31943 449 aaKnown RBP16.11■□□□□ 0.17
CALD1-222ENST00000495522 RDXP35241 583 aaKnown RBP16.11■□□□□ 0.17
CALD1-222ENST00000495522 MPP2Q14168 576 aa16.11■□□□□ 0.17
CALD1-222ENST00000495522 GJC2Q5T442 439 aaPredicted RBP16.11■□□□□ 0.17
CALD1-222ENST00000495522 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
CALD1-222ENST00000495522 TAPT1Q6NXT6 567 aa16.11■□□□□ 0.17
CALD1-222ENST00000495522 PPP1R21Q6ZMI0 780 aa16.11■□□□□ 0.17
CALD1-222ENST00000495522 PPTC7Q8NI37 304 aa16.11■□□□□ 0.17
CALD1-222ENST00000495522 MAML1Q92585 1016 aa16.11■□□□□ 0.17
CALD1-222ENST00000495522 PRCCQ92733 491 aaPredicted RBP16.11■□□□□ 0.17
CALD1-222ENST00000495522 VTA1Q9NP79 307 aa16.11■□□□□ 0.17
CALD1-222ENST00000495522 RASA4BC9J798 803 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 RASA4O43374 803 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 SNX3O60493 162 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 RNF8O76064 485 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 ITGBL1O95965 494 aaPredicted RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 VTNP04004 478 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 GPD2P43304 727 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 SNAPC2Q13487 334 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 FASTKD3Q14CZ7 662 aaKnown RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 ZBED8Q8IZ13 594 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 KCTD6Q8NC69 237 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 GTF3C2Q8WUA4 911 aaPredicted RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 HEXIM2Q96MH2 286 aaKnown RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 SAE1Q9UBE0 346 aaPredicted RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 ITGA11Q9UKX5 1188 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 AGAP1Q9UPQ3 857 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 OAS1P00973 400 aaKnown RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 GCAP28676 217 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 MIPP30301 263 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 STX2P32856 288 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 MKRN3Q13064 507 aaKnown RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 ZNF792Q3KQV3 632 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 TTC39CQ8N584 583 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 CMASQ8NFW8 434 aaPredicted RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 GDAP1Q8TB36 358 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 ADPGKQ9BRR6 497 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 PHACTR1Q9C0D0 580 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 FAM124BQ9H5Z6 455 aaPredicted RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 VPS37BQ9H9H4 285 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 PPCSQ9HAB8 311 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 MLXIPLQ9NP71 852 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 UBN1Q9NPG3 1134 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 FGFR1OP2Q9NVK5 253 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 ASNSD1Q9NWL6 643 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 PCSK1NQ9UHG2 260 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 BARX2Q9UMQ3 279 aaPredicted RBP16.1■□□□□ 0.17
CALD1-222ENST00000495522 C2CD2Q9Y426 696 aa16.1■□□□□ 0.17
CALD1-222ENST00000495522 ATP2C2O75185 946 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 CYP2C8P10632 490 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 CTCFP49711 727 aaPredicted RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 CCNA1P78396 465 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 RBP5P82980 135 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 INCA1Q0VD86 236 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 PDIA2Q13087 525 aaKnown RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 HIF1AQ16665 826 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 FAM102AQ5T9C2 384 aaPredicted RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 USP50Q70EL3 339 aaPredicted RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 RFX6Q8HWS3 928 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 PPIL6Q8IXY8 311 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 AFG1LQ8WV93 481 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 NLRP7Q8WX94 980 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 RSAD2Q8WXG1 361 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 EMID1Q96A84 441 aaPredicted RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 MAGEB18Q96M61 343 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 USP18Q9UMW8 372 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 USP15Q9Y4E8 981 aaPredicted RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 APOC4-APOC2K7ER74 178 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 STAU1O95793 577 aaKnown RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 TRUB2O95900 331 aaKnown RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 APOC2P02655 101 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 CD48P09326 243 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 ZNF286BP0CG31 522 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 PCK1P35558 622 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 GJA5P36382 358 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 PSMC4P43686 418 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 SF3A3Q12874 501 aaKnown RBP eCLIP16.09■□□□□ 0.17
CALD1-222ENST00000495522 HP1BP3Q5SSJ5 553 aaPredicted RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 NUGGCQ68CJ6 796 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 MTHFD1LQ6UB35 978 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 MAMDC4Q6UXC1 1216 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 TRPM8Q7Z2W7 1104 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 TRABD2AQ86V40 505 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 NT5DC4Q86YG4 428 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 ZC3H15Q8WU90 426 aaKnown RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 SGSM3Q96HU1 749 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 ACAP3Q96P50 834 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 TGS1Q96RS0 853 aaKnown RBP16.09■□□□□ 0.17
CALD1-222ENST00000495522 MIS12Q9H081 205 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 SLC40A1Q9NP59 571 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 DPP3Q9NY33 737 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 KIAA1257Q9ULG3 409 aa16.09■□□□□ 0.17
CALD1-222ENST00000495522 RBM47A0AV96 593 aaKnown RBP16.08■□□□□ 0.16
CALD1-222ENST00000495522 FAM47DPA6NHR8 397 aa16.08■□□□□ 0.16
CALD1-222ENST00000495522 POC1B-GALNT4F8VUJ3 575 aa16.08■□□□□ 0.16
CALD1-222ENST00000495522 TSPAN1O60635 241 aa16.08■□□□□ 0.16
CALD1-222ENST00000495522 RASSF9O75901 435 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms