RNA–Protein interactions for RNA: ENST00000494707.5

RPGR-209, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 5

Gene RPGR, Length 426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-209ENST00000494707 XPR1Q9UBH6 696 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 CPNE7Q9UBL6 633 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 FAM50BQ9Y247 325 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 USP19O94966 1318 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 TRIM43BA6NCK2 446 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 DCLK1O15075 740 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 PMM2O15305 246 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 SRGNP10124 158 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 PPP3CBP16298 524 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 ZKSCAN1P17029 563 aaPredicted RBP3.19□□□□□ -1.9
RPGR-209ENST00000494707 KLRC1P26715 233 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 PPIFP30405 207 aaKnown RBP3.19□□□□□ -1.9
RPGR-209ENST00000494707 ABCG1P45844 678 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 TOB1P50616 345 aaPredicted RBP3.19□□□□□ -1.9
RPGR-209ENST00000494707 LILRA4P59901 499 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 NHLH1Q02575 133 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 KRT17Q04695 432 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 ITIH3Q06033 890 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 CTBP1Q13363 440 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 BOP1Q14137 746 aaKnown RBP3.19□□□□□ -1.9
RPGR-209ENST00000494707 SF3B3Q15393 1217 aaKnown RBP3.19□□□□□ -1.9
RPGR-209ENST00000494707 MGAT5BQ3V5L5 792 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 C11orf96Q7Z7L8 435 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 MICU3Q86XE3 530 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 PJA1Q8NG27 643 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 SLC30A5Q8TAD4 765 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 FBXO41Q8TF61 875 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 SCARB1Q8WTV0 552 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 MAML1Q92585 1016 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 TRIM43Q96BQ3 446 aaPredicted RBP3.19□□□□□ -1.9
RPGR-209ENST00000494707 MSLNLQ96KJ4 702 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 NELL2Q99435 816 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 APOL5Q9BWW9 433 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 ACTRT3Q9BYD9 372 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 SLC29A3Q9BZD2 475 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 TPSD1Q9BZJ3 242 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 MS4A7Q9GZW8 240 aaPredicted RBP3.19□□□□□ -1.9
RPGR-209ENST00000494707 ARNT2Q9HBZ2 717 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 CPNE5Q9HCH3 593 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 PNPLA8Q9NP80 782 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 SACM1LQ9NTJ5 587 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 ZSCAN32Q9NX65 697 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 STK32BQ9NY57 414 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.19□□□□□ -1.9
RPGR-209ENST00000494707 SNX13Q9Y5W8 968 aa3.19□□□□□ -1.9
RPGR-209ENST00000494707 ANO9A1A5B4 782 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 RHPN2P1A8MT19 583 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 YY2O15391 372 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 PROM1O43490 865 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 ORC4O43929 436 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 GATA3P23771 443 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 LRPAP1P30533 357 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 ZNF134P52741 427 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 PROK1P58294 105 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 NXPH1P58417 271 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 RPS16P62249 146 aaKnown RBP3.18□□□□□ -1.9
RPGR-209ENST00000494707 FMO1Q01740 532 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 FOXF2Q12947 444 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 IFIT5Q13325 482 aaKnown RBP3.18□□□□□ -1.9
RPGR-209ENST00000494707 PICALMQ13492 652 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 GPR162Q16538 588 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 NBPF8Q3BBV2 869 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 C3orf38Q5JPI3 329 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 TSTD2Q5T7W7 516 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 TEDDM1Q5T9Z0 273 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 ARHGAP40Q5TG30 622 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 DCAF12L1Q5VU92 463 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 ICE2Q659A1 982 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 VWA1Q6PCB0 445 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 PEG10Q86TG7 708 aaKnown RBP3.18□□□□□ -1.9
RPGR-209ENST00000494707 SESTD1Q86VW0 696 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 GAS2L3Q86XJ1 694 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 SRRM1Q8IYB3 904 aaKnown RBP3.18□□□□□ -1.9
RPGR-209ENST00000494707 CCDC146Q8IYE0 955 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 FAM109AQ8N4B1 249 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 TOR1AIP2Q8NFQ8 470 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 MYCBPAPQ8TBZ2 947 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 IPCEF1Q8WWN9 437 aaPredicted RBP3.18□□□□□ -1.9
RPGR-209ENST00000494707 LPIN2Q92539 896 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 PHKBQ93100 1093 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 SPSB4Q96A44 273 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 FAM136AQ96C01 138 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 FBXL20Q96IG2 436 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 PGBD1Q96JS3 809 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 UROC1Q96N76 676 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 PPP1R9BQ96SB3 815 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 MESP1Q9BRJ9 268 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 PTDSS2Q9BVG9 487 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 STK31Q9BXU1 1019 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 UNKQ9C0B0 810 aaKnown RBP3.18□□□□□ -1.9
RPGR-209ENST00000494707 CORO2BQ9UQ03 480 aa3.18□□□□□ -1.9
RPGR-209ENST00000494707 COL11A2P13942 1736 aaPredicted RBP3.18□□□□□ -1.9
RPGR-209ENST00000494707 POLR2AP24928 1970 aaKnown RBP3.18□□□□□ -1.9
RPGR-209ENST00000494707 DNAJC9-AS1A6NH13 148 aa3.17□□□□□ -1.9
RPGR-209ENST00000494707 TMEM233B4DJY2 109 aa3.17□□□□□ -1.9
RPGR-209ENST00000494707 PYCARD-AS1I3L0S3 204 aa3.17□□□□□ -1.9
RPGR-209ENST00000494707 APAF1O14727 1248 aa3.17□□□□□ -1.9
RPGR-209ENST00000494707 CCP110O43303 1012 aa3.17□□□□□ -1.9
RPGR-209ENST00000494707 RASSF9O75901 435 aa3.17□□□□□ -1.9
RPGR-209ENST00000494707 FOLR3P41439 243 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms