RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 NAP1L5Q96NT1 182 aaPredicted RBP11.82□□□□□ -0.52
APTX-230ENST00000494649 WDR6Q9NNW5 1121 aaKnown RBP11.82□□□□□ -0.52
APTX-230ENST00000494649 CD320Q9NPF0 282 aa11.82□□□□□ -0.52
APTX-230ENST00000494649 DNAJC12Q9UKB3 198 aa11.82□□□□□ -0.52
APTX-230ENST00000494649 FHOD1Q9Y613 1164 aa11.82□□□□□ -0.52
APTX-230ENST00000494649 C2CD4DB7Z1M9 353 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 AP1G2O75843 785 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 PTPN2P17706 415 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 FSHRP23945 695 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 BRD2P25440 801 aaKnown RBP11.81□□□□□ -0.52
APTX-230ENST00000494649 HOXA9P31269 272 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 USP46P62068 366 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 VEPH1Q14D04 833 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 SYCP1Q15431 976 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 FKBP15Q5T1M5 1219 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 POTEHQ6S545 545 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 PDZD4Q76G19 769 aaPredicted RBP11.81□□□□□ -0.52
APTX-230ENST00000494649 CRYBG2Q8N1P7 616 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 RBBP8NLQ8NC74 664 aaPredicted RBP11.81□□□□□ -0.52
APTX-230ENST00000494649 C2orf15Q8WU43 125 aaKnown RBP11.81□□□□□ -0.52
APTX-230ENST00000494649 PHF7Q9BWX1 381 aaPredicted RBP11.81□□□□□ -0.52
APTX-230ENST00000494649 ASAH2Q9NR71 780 aa11.81□□□□□ -0.52
APTX-230ENST00000494649 MRPS23Q9Y3D9 190 aaKnown RBP11.81□□□□□ -0.52
APTX-230ENST00000494649 GTPBP10A4D1E9 387 aaKnown RBP11.8□□□□□ -0.52
APTX-230ENST00000494649 LGALS16A8MUM7 142 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 TRIOO75962 3097 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 FAM163BP0C2L3 166 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 CEBPBP17676 345 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 CYP4F8P98187 520 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 GCNT1Q02742 428 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 SMARCB1Q12824 385 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 UBR7Q8N806 425 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 TTC16Q8NEE8 873 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 TFAP2BQ92481 460 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 PSMG2Q969U7 264 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 MCRS1Q96EZ8 462 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 FUBP3Q96I24 572 aaKnown RBP eCLIP11.8□□□□□ -0.52
APTX-230ENST00000494649 MYADMQ96S97 322 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 SMOQ99835 787 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 NLRC4Q9NPP4 1024 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 FAM50BQ9Y247 325 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 SLC38A8A6NNN8 435 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 C1RP00736 705 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 ASGR2P07307 311 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 ANXA13P27216 316 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 GABRR2P28476 465 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 MFAP3P55082 362 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 ZP2Q05996 745 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 TEAD2Q15562 447 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 GOLGA7BQ2TAP0 167 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 PUS10Q3MIT2 529 aaKnown RBP11.8□□□□□ -0.52
APTX-230ENST00000494649 CYP4A22Q5TCH4 519 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 DPY19L2P1Q6NXN4 242 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 TMC8Q8IU68 726 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 ZMIZ2Q8NF64 920 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 SCAMP5Q8TAC9 235 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 UBA3Q8TBC4 463 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 FGF13Q92913 245 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 SMARCD1Q96GM5 515 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 NECTIN4Q96NY8 510 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 UHRF1Q96T88 793 aaPredicted RBP11.8□□□□□ -0.52
APTX-230ENST00000494649 ZSWIM1Q9BR11 485 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 ATXN3LQ9H3M9 355 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 SLITRK6Q9H5Y7 841 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 ABCB6Q9NP58 842 aa11.8□□□□□ -0.52
APTX-230ENST00000494649 NOTCH4Q99466 2003 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 TULP2O00295 520 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 PIK3R2O00459 728 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 ABL1P00519 1130 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 HMGA1P17096 107 aaKnown RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 POLR2FP61218 127 aaKnown RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 YWHAEP62258 255 aaKnown RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 RPL10AP62906 217 aaKnown RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 TPM4P67936 248 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 KLHDC7AQ5VTJ3 777 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 CLEC20AQ6ZU45 233 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 GAREM2Q75VX8 874 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 GPRIN1Q7Z2K8 1008 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 ADHFE1Q8IWW8 467 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 RSAD2Q8WXG1 361 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 LIMD1Q9UGP4 676 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 TSPAN16Q9UKR8 245 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 FOXN3O00409 490 aaPredicted RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 CYP26A1O43174 497 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 NOL4O94818 638 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 CFHP08603 1231 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 FAM200BP0CF97 657 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 UCHL3P15374 230 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 TRIM21P19474 475 aaKnown RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 FANCCQ00597 558 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 DRAP1Q14919 205 aaPredicted RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 SGO2Q562F6 1265 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 VSTM1Q6UX27 236 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 DENND5BQ6ZUT9 1274 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 ITIH5Q86UX2 942 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 TTC30AQ86WT1 665 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 TDRD5Q8NAT2 981 aaKnown RBP11.79□□□□□ -0.52
APTX-230ENST00000494649 SHKBP1Q8TBC3 707 aa11.79□□□□□ -0.52
APTX-230ENST00000494649 ZSWIM3Q96MP5 696 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms