RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 DPCR1Q3MIW9 517 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 ARSHQ5FYA8 562 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 TMEM196Q5HYL7 178 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 SLC39A4Q6P5W5 647 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 CACNA2D4Q7Z3S7 1137 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 MAB21L3Q8N8X9 362 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 ERCC4Q92889 916 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 USP13Q92995 863 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 HVCN1Q96D96 273 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 BICD1Q96G01 975 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 FAM83CQ9BQN1 747 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 DUSP15Q9H1R2 295 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 ZHX3Q9H4I2 956 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 TASP1Q9H6P5 420 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 TMLHEQ9NVH6 421 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 UBQLN1Q9UMX0 589 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 OBSL1O75147 1896 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 MYO16Q9Y6X6 1858 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 LOC400499M0QZD8 3231 aa12.63□□□□□ -0.39
CSNK1E-212ENST00000494610 PKD1L2Q7Z442 2459 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 GOLGA6L19H0YKK7 550 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 IKBKBO14920 756 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 CASP1P29466 404 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 HOXA6P31267 233 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 GALK1P51570 392 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 LIMK1P53667 647 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 EHHADHQ08426 723 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 PAK1Q13153 545 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 RUNX3Q13761 415 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 PLK5Q496M5 336 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 ARHGAP15Q53QZ3 475 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 L1TD1Q5T7N2 865 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 C9orf57Q5W0N0 161 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 TXNDC8Q6A555 127 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 ZPBP2Q6X784 338 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 HAUS6Q7Z4H7 955 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 SFR1Q86XK3 245 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 GUF1Q8N442 669 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 MYCT1Q8N699 235 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 SPIRE2Q8WWL2 714 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 MSANTD3Q96H12 275 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 DHTKD1Q96HY7 919 aaPredicted RBP12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 TSG101Q99816 390 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 LSM14BQ9BX40 385 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 SLC8A2Q9UPR5 921 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 CELSR3Q9NYQ7 3312 aa12.62□□□□□ -0.39
CSNK1E-212ENST00000494610 C4orf47A7E2U8 309 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 PATE3B3GLJ2 98 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 HMGA1P17096 107 aaKnown RBP12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 TYMPP19971 482 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 CYP3A5P20815 502 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 ACOT2P49753 483 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 MYL5Q02045 173 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 FOXC1Q12948 553 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 MYBPC2Q14324 1141 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 SPATA1Q5VX52 437 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 WSCD1Q658N2 575 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 RNF43Q68DV7 783 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 ARMCX5Q6P1M9 558 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 CMTM8Q8IZV2 173 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 RPLP0P6Q8NHW5 317 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 SLC22A12Q96S37 553 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 CYP2S1Q96SQ9 504 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 ZCWPW1Q9H0M4 648 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 MRPL44Q9H9J2 332 aaKnown RBP12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 PLEKHA5Q9HAU0 1116 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 ABI2Q9NYB9 513 aaPredicted RBP12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 MAGED2Q9UNF1 606 aaPredicted RBP12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 ASB3Q9Y575 518 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 PCDHB13Q9Y5F0 798 aa12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 SMG1Q96Q15 3661 aaKnown RBP12.61□□□□□ -0.39
CSNK1E-212ENST00000494610 ANKRD63C9JTQ0 380 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 K7ENM7 598 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 PIRO00625 290 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 HCRTO43612 131 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 FGFR1OPO95684 399 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 F11P03951 625 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 ODC1P11926 461 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 LIG4P49917 911 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 NCKAP1LP55160 1127 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 WNT7BP56706 349 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 SHC2P98077 582 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 CREB5Q02930 508 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 LRRC63Q05C16 580 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 COL9A2Q14055 689 aaPredicted RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 TPD52L1Q16890 204 aaPredicted RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 C1orf228Q6PIY5 440 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 C11orf57Q6ZUT1 292 aaPredicted RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 ITIH5Q86UX2 942 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 SYNPOQ8N3V7 929 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 GOLGA5Q8TBA6 731 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 DDX1Q92499 740 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 ANP32BQ92688 251 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 EDEM2Q9BV94 578 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 TPSD1Q9BZJ3 242 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms