RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CCDC134Q9H6E4 229 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 DONSONQ9NYP3 566 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 PARP2Q9UGN5 583 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 NOTCH4Q99466 2003 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 GOLGA6L10A0A0M3HER8 536 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 FRMD3A2A2Y4 597 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 TMEM8BA6NDV4 472 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 SMCO2A6NFE2 343 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 MYMKA6NI61 221 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 PP2D1A8MPX8 630 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 C1QTNF9BB2RNN3 333 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 DDX39AO00148 427 aaKnown RBP11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 RFPL2O75678 378 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 C22orf31O95567 290 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 KRT14P02533 472 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 VTNP04004 478 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 ADH1AP07327 375 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 NUDT17P0C025 328 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 C1QTNF9P0C862 333 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 EZRP15311 586 aaKnown RBP11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 EIF4BP23588 611 aaKnown RBP11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 SLC7A5Q01650 507 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 PFKPQ01813 784 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 GFPT1Q06210 699 aaPredicted RBP11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 RIPK1Q13546 671 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 DHX34Q14147 1143 aaKnown RBP11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 NFIL3Q16649 462 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 CEP85LQ5SZL2 805 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 IL31Q6EBC2 164 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 RNF169Q8NCN4 708 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 GIMAP7Q8NHV1 300 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 FGF14Q92915 247 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 GDAP1L1Q96MZ0 367 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 ANKRD27Q96NW4 1050 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 KRT12Q99456 494 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 TMEM109Q9BVC6 243 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 NSRP1Q9H0G5 558 aaKnown RBP11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 GANQ9H2C0 597 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 MRPL17Q9NRX2 175 aaKnown RBP11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 KCNH7Q9NS40 1196 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 TBC1D13Q9NVG8 400 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 NENFQ9UMX5 172 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 NFS1Q9Y697 457 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 NCANO14594 1321 aa11.27□□□□□ -0.61
PDLIM1-205ENST00000493949 E7EVH7 732 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 CETN3O15182 167 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 EPHB6O15197 1021 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 ASAP2O43150 1006 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 RAD51CO43502 376 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 CCNE2O96020 404 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 GLUD1P00367 558 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 FERP16591 822 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 ATP4AP20648 1035 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 FGFR4P22455 802 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 TARSP26639 723 aaKnown RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 CTNNA1P35221 906 aaKnown RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 HSD17B3P37058 310 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 SLC11A1P49279 550 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 ADCY7P51828 1080 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 HADHBP55084 474 aaKnown RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 NLRP11P59045 1033 aaKnown RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 KCNMA1Q12791 1236 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 BYSLQ13895 437 aaKnown RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 LPAL2Q16609 132 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 PARM1Q6UWI2 310 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 ABHD15Q6UXT9 468 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 MTSS1LQ765P7 747 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 GET4Q7L5D6 327 aaPredicted RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 LINC01465Q8N7H1 131 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 GBP7Q8N8V2 638 aaPredicted RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 LRRC57Q8N9N7 239 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 ST13P5Q8NFI4 369 aaPredicted RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 TBCKQ8TEA7 893 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 LRRC15Q8TF66 581 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 TATDN2Q93075 761 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 PGM2Q96G03 612 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 PNMA5Q96PV4 448 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 RPS6KC1Q96S38 1066 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 IER2Q9BTL4 223 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 LSM14BQ9BX40 385 aaKnown RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 PRKD2Q9BZL6 878 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 PLEKHA4Q9H4M7 779 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 RXFP1Q9HBX9 757 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 SLC39A2Q9NP94 309 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 BATF3Q9NR55 127 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 ZDHHC7Q9NXF8 308 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 DNAJB4Q9UDY4 337 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 RASAL2Q9UJF2 1139 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 TFR2Q9UP52 801 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 TRAF3IP3Q9Y228 551 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 SSX2IPQ9Y2D8 614 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 UTP11Q9Y3A2 253 aaKnown RBP11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 UBE4BO95155 1302 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 NAV2Q8IVL1 2488 aa11.26□□□□□ -0.61
PDLIM1-205ENST00000493949 SHISA7A6NL88 538 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 CCDC169A6NNP5 214 aa11.25□□□□□ -0.61
PDLIM1-205ENST00000493949 TEX28O15482 410 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms