RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 PSMC1P62191 440 aaKnown RBP14.49□□□□□ -0.09
VCP-207ENST00000493886 IRX1P78414 480 aaPredicted RBP14.49□□□□□ -0.09
VCP-207ENST00000493886 DCAF4L1Q3SXM0 396 aa14.49□□□□□ -0.09
VCP-207ENST00000493886 ERMARDQ5T6L9 678 aa14.49□□□□□ -0.09
VCP-207ENST00000493886 TXNRD3NBQ6F5E7 133 aa14.49□□□□□ -0.09
VCP-207ENST00000493886 LRRC34Q8IZ02 419 aa14.49□□□□□ -0.09
VCP-207ENST00000493886 SNF8Q96H20 258 aa14.49□□□□□ -0.09
VCP-207ENST00000493886 CPXM1Q96SM3 734 aa14.49□□□□□ -0.09
VCP-207ENST00000493886 DOCK3Q8IZD9 2030 aa14.49□□□□□ -0.09
VCP-207ENST00000493886 A6NJR5 290 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 NPTXRO95502 500 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 KRT10P13645 584 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 CREB1P16220 341 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 CDR1P51861 262 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 ADCY2Q08462 1091 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 KAZNQ674X7 775 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 JOSD2Q8TAC2 188 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 PPP1R13LQ8WUF5 828 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 PWWP2AQ96N64 755 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 GCOM2Q9BZD3 368 aaPredicted RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 SYNCQ9H7C4 482 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 CTNNAL1Q9UBT7 734 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.48□□□□□ -0.09
VCP-207ENST00000493886 SMIM10L2AP0DMW4 78 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 SMIM10L2BP0DMW5 78 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 VDRP11473 427 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 ATF7P17544 494 aaPredicted RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 PSMA2P25787 234 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 HOXA11P31270 313 aaPredicted RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 SCTRP47872 440 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 MORN1Q5T089 497 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 RHBDF2Q6PJF5 856 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 HEXIM2Q96MH2 286 aaKnown RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 ELAC2Q9BQ52 826 aaKnown RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 RRAGCQ9HB90 399 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 INTS9Q9NV88 658 aaKnown RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 WDR35Q9P2L0 1181 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 BARX2Q9UMQ3 279 aaPredicted RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 GNEQ9Y223 722 aaKnown RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 NEU2Q9Y3R4 380 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 ZNF236Q9UL36 1845 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 M0QYV0 167 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 GPR32O75388 356 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 STAU1O95793 577 aaKnown RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 F2P00734 622 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 ERBB2P04626 1255 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 ATF2P15336 505 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 INCA1Q0VD86 236 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 MAP2K5Q13163 448 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 ZRSR2Q15696 482 aaKnown RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 SPOCD1Q6ZMY3 1216 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 CATSPER4Q7RTX7 472 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 XYLT1Q86Y38 959 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 ARL10Q8N8L6 244 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 DDX56Q9NY93 547 aaKnown RBP14.48□□□□□ -0.09
VCP-207ENST00000493886 NRCAMQ92823 1304 aa14.48□□□□□ -0.09
VCP-207ENST00000493886 RIPK2O43353 540 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 TJP3O95049 919 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 ITGBL1O95965 494 aaPredicted RBP14.47□□□□□ -0.09
VCP-207ENST00000493886 ADCY8P40145 1251 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 NDST1P52848 882 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 COPS2P61201 443 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 CNGA2Q16280 664 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 ZNF365Q70YC5 407 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 GIMAP7Q8NHV1 300 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 FNIP1Q8TF40 1166 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 ATXN2LQ8WWM7 1075 aaKnown RBP14.47□□□□□ -0.09
VCP-207ENST00000493886 ACSF2Q96CM8 615 aaPredicted RBP14.47□□□□□ -0.09
VCP-207ENST00000493886 CNOT10Q9H9A5 744 aaKnown RBP14.47□□□□□ -0.09
VCP-207ENST00000493886 CDHR5Q9HBB8 845 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 AAASQ9NRG9 546 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 SNTG2Q9NY99 539 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 TRIP11Q15643 1979 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 EME2A4GXA9 379 aaPredicted RBP14.47□□□□□ -0.09
VCP-207ENST00000493886 RASGRF2O14827 1237 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 HMGCRP04035 888 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 ITGA8P53708 1063 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 CDC42EP1Q00587 391 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 ZNF268Q14587 947 aaPredicted RBP14.47□□□□□ -0.09
VCP-207ENST00000493886 FAM133BQ5BKY9 247 aaKnown RBP14.47□□□□□ -0.09
VCP-207ENST00000493886 APBB1IPQ7Z5R6 666 aaPredicted RBP14.47□□□□□ -0.09
VCP-207ENST00000493886 CEP57Q86XR8 500 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 OSMRQ99650 979 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 CXCL16Q9H2A7 254 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 METTL5Q9NRN9 209 aaKnown RBP14.47□□□□□ -0.09
VCP-207ENST00000493886 FLRT1Q9NZU1 646 aa14.47□□□□□ -0.09
VCP-207ENST00000493886 LRRD1A4D1F6 860 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 C5orf60A6NFR6 353 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 PTPN7P35236 360 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 CHKAP35790 457 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 GPD2P43304 727 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 MMP13P45452 471 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 SLC27A1Q6PCB7 646 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 DPH6Q7L8W6 267 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 TLK2Q86UE8 772 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 CCDC89Q8N998 374 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 ANKRD42Q8N9B4 389 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 CCDC197Q8NCU1 140 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 DYDC1Q8WWB3 177 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 LENG1Q96BZ8 264 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms