RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 XRCC6P12956 609 aaKnown RBP eCLIP4.64□□□□□ -1.67
CD46-217ENST00000493796 EN2P19622 333 aaPredicted RBP4.64□□□□□ -1.67
CD46-217ENST00000493796 LRPAP1P30533 357 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 SLC7A1P30825 629 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 C21orf58P58505 322 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 SP2Q02086 613 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 CTBP1Q13363 440 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 E2F2Q14209 437 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 CNN3Q15417 329 aaKnown RBP4.64□□□□□ -1.67
CD46-217ENST00000493796 FAM153CQ494X1 144 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 RGS7BPQ6MZT1 257 aaPredicted RBP4.64□□□□□ -1.67
CD46-217ENST00000493796 RASAL3Q86YV0 1011 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 MYO1HQ8N1T3 1032 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 ATG4AQ8WYN0 398 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 C22orf23Q9BZE7 217 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 SMURF2Q9HAU4 748 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 ARHGEF3Q9NR81 526 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 ADAM21Q9UKJ8 722 aa4.64□□□□□ -1.67
CD46-217ENST00000493796 EIF4G3O43432 1585 aaKnown RBP4.64□□□□□ -1.67
CD46-217ENST00000493796 PCSK5Q92824 1860 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 hCG_1984214I3L0E3 225 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 TBX3O15119 743 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 FRS3O43559 492 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 MARCH6O60337 910 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 TBC1D4O60343 1298 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 EBLN1P0CF75 366 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 JUPP14923 745 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 DRD4P21917 467 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 LIPAP38571 399 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 CCT8P50990 548 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 CLCN2P51788 898 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 SATB1Q01826 763 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 MYO1EQ12965 1108 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 SLC13A2Q13183 592 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 LLGL1Q15334 1064 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 CCDC142Q17RM4 750 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 ZIK1Q3SY52 487 aaPredicted RBP4.63□□□□□ -1.67
CD46-217ENST00000493796 APOA5Q6Q788 366 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 GAS2L3Q86XJ1 694 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 ZNF280BQ86YH2 543 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 MAML1Q92585 1016 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 TSR2Q969E8 191 aaKnown RBP4.63□□□□□ -1.67
CD46-217ENST00000493796 SUCLG2Q96I99 432 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 CXorf36Q9H7Y0 433 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 FAM204AQ9H8W3 233 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 DDX20Q9UHI6 824 aaKnown RBP4.63□□□□□ -1.67
CD46-217ENST00000493796 SH2B3Q9UQQ2 575 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 MRPS17Q9Y2R5 130 aaKnown RBP4.63□□□□□ -1.67
CD46-217ENST00000493796 USP19O94966 1318 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 PBRM1Q86U86 1689 aa4.63□□□□□ -1.67
CD46-217ENST00000493796 ARHGEF17Q96PE2 2063 aaPredicted RBP4.62□□□□□ -1.67
CD46-217ENST00000493796 CFAP69A5D8W1 941 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 GOLGA6CA6NDK9 693 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 GOLGA6BA6NDN3 693 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 RBMXL2O75526 392 aaKnown RBP4.62□□□□□ -1.67
CD46-217ENST00000493796 ONECUT2O95948 504 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 ERBB2P04626 1255 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 CSF1RP07333 972 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 IL6RP08887 468 aaPredicted RBP4.62□□□□□ -1.67
CD46-217ENST00000493796 GOLGA6DP0CG33 693 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 NDUFB7P17568 137 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 ALDH9A1P49189 494 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 ATXN1P54253 815 aaKnown RBP4.62□□□□□ -1.67
CD46-217ENST00000493796 PROK1P58294 105 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 MRPS21P82921 87 aaKnown RBP4.62□□□□□ -1.67
CD46-217ENST00000493796 KRT17Q04695 432 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 RAB32Q13637 225 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 MGAT5BQ3V5L5 792 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 TREML2Q5T2D2 321 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 AMIGO2Q86SJ2 522 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 ZNF518BQ9C0D4 1074 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 MS4A7Q9GZW8 240 aaPredicted RBP4.62□□□□□ -1.67
CD46-217ENST00000493796 GOLGA6AQ9NYA3 693 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 WNT6Q9Y6F9 365 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 CHD1O14646 1710 aa4.62□□□□□ -1.67
CD46-217ENST00000493796 VSTM5A8MXK1 200 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 TMEM233B4DJY2 109 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 ZNF37AP17032 561 aaPredicted RBP4.61□□□□□ -1.67
CD46-217ENST00000493796 PDE6CP51160 858 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 DGKEP52429 567 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 CACNB3P54284 484 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 SUMO3P55854 103 aaPredicted RBP4.61□□□□□ -1.67
CD46-217ENST00000493796 GBX1Q14549 363 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 GRM3Q14832 879 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 GFOD2Q3B7J2 385 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 PLA1AQ53H76 456 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 COLEC12Q5KU26 742 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 ANKRD16Q6P6B7 361 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 ZNF788Q6ZQV5 615 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 CHST15Q7LFX5 561 aaPredicted RBP4.61□□□□□ -1.67
CD46-217ENST00000493796 WDR53Q7Z5U6 358 aaPredicted RBP4.61□□□□□ -1.67
CD46-217ENST00000493796 SRGAP1Q7Z6B7 1085 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 SLC15A3Q8IY34 581 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 MPP5Q8N3R9 675 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 GLG1Q92896 1179 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 VOPP1Q96AW1 172 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 GLOD4Q9HC38 313 aa4.61□□□□□ -1.67
CD46-217ENST00000493796 ADARB2Q9NS39 739 aaKnown RBP4.61□□□□□ -1.67
CD46-217ENST00000493796 STK32BQ9NY57 414 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms