RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 AP5Z1O43299 807 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 SEC24AO95486 1093 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 PNMA6AP0CW24 399 aaPredicted RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 SETSIPP0DME0 302 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CYP11B1P15538 503 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 NPR3P17342 541 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CYP2F1P24903 491 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CDC25BP30305 580 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 HOXA9P31269 272 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CASP14P31944 242 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 SNX16P57768 344 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 KLHL30Q0D2K2 578 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 BST2Q10589 180 aaKnown RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 TWF1Q12792 350 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 ADAM15Q13444 863 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 GSE1Q14687 1217 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CNGA2Q16280 664 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CCDC142Q17RM4 750 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 TDRD12Q587J7 1177 aaKnown RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 RARS2Q5T160 578 aaKnown RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CES5AQ6NT32 575 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 ANKRD54Q6NXT1 300 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 LCLAT1Q6UWP7 414 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 TMEM184AQ6ZMB5 413 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 SLC47A2Q86VL8 602 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 VPS36Q86VN1 386 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 ZNF677Q86XU0 584 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 FUKQ8N0W3 1084 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 MSANTD4Q8NCY6 345 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 MAFAQ8NHW3 353 aaPredicted RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 BAP1Q92560 729 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CEP295NLQ96MC4 621 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 ZNF512Q96ME7 567 aaPredicted RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 NOX5Q96PH1 765 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 DUSP16Q9BY84 665 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 GPR88Q9GZN0 384 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 SEPT11Q9NVA2 429 aaKnown RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 TSPAN16Q9UKR8 245 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 ASB3Q9Y575 518 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 NME7Q9Y5B8 376 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CCDC195A0A1B0GUA6 201 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 F8VP50 259 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 O00370 1275 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 CCL16O15467 120 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 LINC01565O15544 149 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 SOAT2O75908 522 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 MICAL2O94851 1124 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 FGF19O95750 216 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 GYPCP04921 128 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 CSH1P0DML2 217 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 CSH2P0DML3 217 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 CLCN1P35523 988 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 MAP3K7CLP57077 242 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 ITIH3Q06033 890 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 MEA1Q16626 185 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 DDR2Q16832 855 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 TAF3Q5VWG9 929 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 TMC5Q6UXY8 1006 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 CYP26C1Q6V0L0 522 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 GPIHBP1Q8IV16 184 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 TTC9BQ8N6N2 239 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 ANKRD52Q8NB46 1076 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 CMASQ8NFW8 434 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-214ENST00000493786 OR8K1Q8NGG5 319 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 EPS8L1Q8TE68 723 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 GIPC2Q8TF65 315 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 ZNF606Q8WXB4 792 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 TFAP2BQ92481 460 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 SMG7Q92540 1137 aaKnown RBP8.04□□□□□ -1.12
VEGFA-214ENST00000493786 SYN2Q92777 582 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-214ENST00000493786 HLA-CQ95604 372 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 SPATA17Q96L03 361 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 C8orf48Q96LL4 319 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 GCNAQ96QF7 691 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 RHOBTB2Q9BYZ6 727 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 PRKD2Q9BZL6 878 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 TTYH3Q9C0H2 523 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 SYNCQ9H7C4 482 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 UBE2ZQ9H832 354 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-214ENST00000493786 PNPLA8Q9NP80 782 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 ASAH2Q9NR71 780 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 UXTQ9UBK9 157 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-214ENST00000493786 CD207Q9UJ71 328 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 COG5Q9UP83 839 aa8.04□□□□□ -1.12
VEGFA-214ENST00000493786 BZW2Q9Y6E2 419 aaKnown RBP8.04□□□□□ -1.12
VEGFA-214ENST00000493786 SLC38A8A6NNN8 435 aa8.03□□□□□ -1.12
VEGFA-214ENST00000493786 XPO1O14980 1071 aaKnown RBP8.03□□□□□ -1.12
VEGFA-214ENST00000493786 MFAP3LO75121 409 aa8.03□□□□□ -1.12
VEGFA-214ENST00000493786 RFPL2O75678 378 aa8.03□□□□□ -1.12
VEGFA-214ENST00000493786 RTN3O95197 1032 aaPredicted RBP8.03□□□□□ -1.12
VEGFA-214ENST00000493786 VNN2O95498 520 aa8.03□□□□□ -1.12
VEGFA-214ENST00000493786 LSM8O95777 96 aaKnown RBP8.03□□□□□ -1.12
VEGFA-214ENST00000493786 GLP2RO95838 553 aa8.03□□□□□ -1.12
VEGFA-214ENST00000493786 CALCAP01258 141 aa8.03□□□□□ -1.12
VEGFA-214ENST00000493786 SERPING1P05155 500 aa8.03□□□□□ -1.12
VEGFA-214ENST00000493786 POU2F2P09086 479 aa8.03□□□□□ -1.12
VEGFA-214ENST00000493786 PTPN2P17706 415 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms