RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 GPD1P21695 349 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 SCNN1AP37088 669 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 CDR1P51861 262 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 FBXO47Q5MNV8 452 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 UBXN11Q5T124 520 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 C6orf118Q5T5N4 469 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 BBS12Q6ZW61 710 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 ALLCQ8N6M5 410 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 ARFGAP1Q8N6T3 406 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 CMASQ8NFW8 434 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 TMEM40Q8WWA1 233 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 MRPL45Q9BRJ2 306 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 SLC4A5Q9BY07 1137 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 SEMA4AQ9H3S1 761 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 KLHL11Q9NVR0 708 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 SMIM28A0A1B0GU29 152 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 PFKMP08237 780 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 KRT10P13645 584 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 GJA9P57773 515 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 NKX3-2P78367 333 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 BEX3Q00994 111 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 SLC29A2Q14542 456 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 OASLQ15646 514 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 KAZNQ674X7 775 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 TXNRD3NBQ6F5E7 133 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 GSTA5Q7RTV2 222 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 LIMS2Q7Z4I7 341 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 SESTD1Q86VW0 696 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 MTG1Q9BT17 334 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 CENPHQ9H3R5 247 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 CNOT10Q9H9A5 744 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 AAASQ9NRG9 546 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 TRIP11Q15643 1979 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 C2CD4BA6NLJ0 364 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 ECM2O94769 699 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 KDELR1P24390 212 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 SV2CQ496J9 727 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 TMEM110Q86TL2 294 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 VSIG1Q86XK7 387 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 CRYBG2Q8N1P7 616 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 SLC35B2Q8TB61 432 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 UBA3Q8TBC4 463 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 C18orf25Q96B23 403 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 UPF3AQ9H1J1 476 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 DNPEPQ9ULA0 475 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 ZNF148Q9UQR1 794 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 SCN1AP35498 2009 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 E5RJQ4 531 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 PPEF2O14830 753 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 TRUB2O95900 331 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 IL1R2P27930 398 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 MIPP30301 263 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 MDH1P40925 334 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 TAF6P49848 677 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 PPP2R2AP63151 447 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 PPP1R26Q5T8A7 1209 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 IZUMO3Q5VZ72 239 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 OR6B2Q6IFH4 312 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 HIBCHQ6NVY1 386 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 ZMYND15Q9H091 742 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 PCDH9Q9HC56 1237 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 HES2Q9Y543 173 aa11.34□□□□□ -0.59
PHACTR4-204ENST00000493669 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 M0QZ92 97 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 DNALI1O14645 258 aaPredicted RBP11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 AGTP01019 485 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 HNRNPH2P55795 449 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 CRHR2Q13324 411 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 KCTD19Q17RG1 926 aaPredicted RBP11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 SOWAHAQ2M3V2 549 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 DNAJC21Q5F1R6 531 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 MFSD14CQ5VZR4 134 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 MFSD5Q6N075 450 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 FAM183BPQ6ZVS7 135 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 DPH6Q7L8W6 267 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 ARCQ7LC44 396 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 ACOT1Q86TX2 421 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 RSPH3Q86UC2 560 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 EMC1Q8N766 993 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 SLC35F5Q8WV83 523 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 CXCL16Q9H2A7 254 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 CDC42EP4Q9H3Q1 356 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 ZWILCHQ9H900 591 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 RSAD1Q9HA92 442 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 USP18Q9UMW8 372 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 NOVA2Q9UNW9 492 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 KPNA7A9QM74 516 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 ENDOD1O94919 500 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 SHBGP04278 402 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 CYBAP13498 195 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 LRPAP1P30533 357 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 ATP1A2P50993 1020 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 FCGRTP55899 365 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 GLRA4Q5JXX5 417 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 OLFML1Q6UWY5 402 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 TTC30AQ86WT1 665 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 ZCCHC9Q8N567 271 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 OR6B3Q8NGW1 331 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 PHACTR1Q9C0D0 580 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 SLC12A6Q9UHW9 1150 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms