RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PDSS2Q86YH6 399 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 CCDC28AQ8IWP9 274 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ATL1Q8WXF7 558 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 VTI1AQ96AJ9 217 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ASIC4Q96FT7 647 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 CSRNP1Q96S65 589 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 PUS7LQ9H0K6 701 aaKnown RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 TP63Q9H3D4 680 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 RUBCNLQ9H714 662 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 SAR1AQ9NR31 198 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 BCAP29Q9UHQ4 241 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 COMMD10Q9Y6G5 202 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 FLT1P17948 1338 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 PNPLA7Q6ZV29 1317 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 EMSYQ7Z589 1322 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 WTIPA6NIX2 430 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 LRRC53A6NM62 1247 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 IDH3BO43837 385 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 PDE8AO60658 829 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 EPN2O95208 641 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 FAM58BPP0C7Q3 252 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 DBTP11182 482 aaKnown RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 GJC1P36383 396 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 CTAG1AP78358 180 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF200P98182 395 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 OTUD4Q01804 1114 aaKnown RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 CALCOCO2Q13137 446 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF618Q5T7W0 954 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 CGB2Q6NT52 195 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 CATSPER3Q86XQ3 398 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 IFNL1Q8IU54 200 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 ANKRD35Q8N283 1001 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 TCAIMQ8N3R3 496 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 MIGA1Q8NAN2 632 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 CDC26Q8NHZ8 85 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 GLG1Q92896 1179 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 NEUROD6Q96NK8 337 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 RUNDC3BQ96NL0 473 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 ATP6V1HQ9UI12 483 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 NEU2Q9Y3R4 380 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 A0A088AWK7 358 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 SMCO2A6NFE2 343 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 CCNT1O60563 726 aaKnown RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 USP12O75317 370 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 C6orf222P0C671 652 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 KRT3P12035 628 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 KRT15P19012 456 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 MAGEA4P43358 317 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 SLC9A3P48764 834 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 MTMR2Q13614 643 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 RAPGEF1Q13905 1077 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 SPARCL1Q14515 664 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 PON2Q15165 354 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 SF3B3Q15393 1217 aaKnown RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 STILQ15468 1287 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 PPM1LQ5SGD2 360 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 UBE2UQ5VVX9 321 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 KRT80Q6KB66 452 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 SH3BP5LQ7L8J4 393 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 SLC51AQ86UW1 340 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 PLPP6Q8IY26 295 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 DIS3L2Q8IYB7 885 aaKnown RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 LILRB2Q8N423 598 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 KRT35Q92764 455 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 MTMR9Q96QG7 549 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 UNKQ9C0B0 810 aaKnown RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 MRPL40Q9NQ50 206 aaKnown RBP7.15□□□□□ -1.26
VPS13B-205ENST00000493587 ZNHIT2Q9UHR6 403 aa7.15□□□□□ -1.26
VPS13B-205ENST00000493587 ILVBLA1L0T0 632 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 CENPBD1B2RD01 187 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 POC1B-GALNT4F8VUJ3 575 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 WNT7AO00755 349 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 KRT8P05787 483 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 SRGNP10124 158 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 RBP3P10745 1247 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 COL6A1P12109 1028 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 RRM1P23921 792 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 RPA1P27694 616 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 FOXN2P32314 431 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 NOVP48745 357 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 GBE1Q04446 702 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 COX10Q12887 443 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 KLHL38Q2WGJ6 581 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 MEI1Q5TIA1 1274 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 BTNL9Q6UXG8 535 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 CYP2U1Q7Z449 544 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 DNAAF5Q86Y56 855 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 SYMPKQ92797 1274 aaKnown RBP7.15□□□□□ -1.27
VPS13B-205ENST00000493587 CFAP36Q96G28 342 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 CNNM2Q9H8M5 875 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 MAP3K20Q9NYL2 800 aaKnown RBP7.15□□□□□ -1.27
VPS13B-205ENST00000493587 TAS2R1Q9NYW7 299 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 COQ3Q9NZJ6 369 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 ARMCX1Q9P291 453 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 DENND2AQ9ULE3 1009 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 KCNJ14Q9UNX9 436 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 SIK3Q9Y2K2 1263 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 STARD13Q9Y3M8 1113 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms