RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CYB561D2O14569 222 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 TBX3O15119 743 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 PROSCO94903 275 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 PHBP35232 272 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 ZNF76P36508 570 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 TMPRSS15P98073 1019 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 FAAP100Q0VG06 881 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 NFX1Q12986 1120 aaKnown RBP12.23□□□□□ -0.45
HDAC4-210ENST00000493582 SLC44A4Q53GD3 710 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 TSHZ1Q6ZSZ6 1077 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 VTI1AQ96AJ9 217 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 FAM84AQ96KN4 292 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 FAM20AQ96MK3 541 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 DHRS4Q9BTZ2 278 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 ANKRD2Q9GZV1 360 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 RBM38Q9H0Z9 239 aaKnown RBP12.23□□□□□ -0.45
HDAC4-210ENST00000493582 RMI1Q9H9A7 625 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 PCDH18Q9HCL0 1135 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 SAE1Q9UBE0 346 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-210ENST00000493582 TUBGCP4Q9UGJ1 667 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 INPP5FQ9Y2H2 1132 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 LAMB2P55268 1798 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 BTBD19C9JJ37 291 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 K7ENM7 598 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 NDC80O14777 642 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 SERPINB8P50452 374 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 NCKAP1LP55160 1127 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 PTK7Q13308 1070 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 BBS9Q3SYG4 887 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 TCHHL1Q5QJ38 904 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-210ENST00000493582 SLC9A9Q8IVB4 645 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 ATP11CQ8NB49 1132 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 HELQQ8TDG4 1101 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 DIS3LQ8TF46 1054 aaKnown RBP12.23□□□□□ -0.45
HDAC4-210ENST00000493582 C20orf27Q9GZN8 174 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 SENP6Q9GZR1 1112 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-210ENST00000493582 PPCSQ9HAB8 311 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 POLIQ9UNA4 740 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 FDFT1P37268 417 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 PPIDQ08752 370 aaKnown RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 ITPK1Q13572 414 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 CC2D2BQ6DHV5 1058 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 MFSD7Q6UXD7 560 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 PIP4K2CQ8TBX8 421 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 PRPF18Q99633 342 aaKnown RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 LIN28AQ9H9Z2 209 aaKnown RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 TIMMDC1Q9NPL8 285 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 TELO2Q9Y4R8 837 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 I3L4J1 428 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 AP1G1O43747 822 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 STRNO43815 780 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 TRMUO75648 421 aaKnown RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 FAM155BO75949 473 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 UNGP13051 313 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 KATNAL2Q8IYT4 538 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 OGFOD1Q8N543 542 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 IRGQQ8WZA9 623 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 SLC35B4Q969S0 331 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 APOPT1Q96IL0 206 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 CNBD2Q96M20 576 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 PI4K2AQ9BTU6 479 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 MRPL1Q9BYD6 325 aaKnown RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 WWP1Q9H0M0 922 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 INIPQ9NRY2 104 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 BARX2Q9UMQ3 279 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 TCRBV7S3A2A0A539 114 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 P4HA2O15460 535 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 PROCP04070 461 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 RHBDL3P58872 404 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 KLHL38Q2WGJ6 581 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 GPATCH4Q5T3I0 446 aaKnown RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 SYCP2LQ5T4T6 812 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 MOXD1Q6UVY6 613 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 DENND5BQ6ZUT9 1274 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 HPS6Q86YV9 775 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 PASD1Q8IV76 773 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 EXD1Q8NHP7 514 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 C11orf70Q9BRQ4 267 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 IQCGQ9H095 443 aaKnown RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 TOPORSQ9NS56 1045 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-210ENST00000493582 HSPBP1Q9NZL4 362 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 SHOC2Q9UQ13 582 aa12.22□□□□□ -0.45
HDAC4-210ENST00000493582 KAT6AQ92794 2004 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 DNAJA2O60884 412 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 CFHP08603 1231 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 VIL1P09327 827 aaKnown RBP12.21□□□□□ -0.45
HDAC4-210ENST00000493582 PEX6Q13608 980 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 CHI3L2Q15782 390 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 DAW1Q8N136 415 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 POMGNT1Q8WZA1 660 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 SRPK1Q96SB4 655 aaKnown RBP12.21□□□□□ -0.45
HDAC4-210ENST00000493582 SLX1AQ9BQ83 275 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 SLC13A1Q9BZW2 595 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 C1orf21Q9H246 121 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 SEL1LQ9UBV2 794 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 DTNAQ9Y4J8 743 aa12.21□□□□□ -0.45
HDAC4-210ENST00000493582 IKBKGQ9Y6K9 419 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms