RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 RAB17Q9H0T7 212 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 CDT1Q9H211 546 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 RBM12Q9NTZ6 932 aaKnown RBP10.65□□□□□ -0.7
PRPF3-206ENST00000493553 PARVAQ9NVD7 372 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 CNOT8Q9UFF9 292 aaKnown RBP10.65□□□□□ -0.7
PRPF3-206ENST00000493553 ITGA11Q9UKX5 1188 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 A0A1B0GUA9 196 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 A6NNZ2 444 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 THAP12O43422 761 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 OPA1O60313 960 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 F2P00734 622 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 STAG3L1P0CL83 205 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 UNGP13051 313 aaPredicted RBP10.64□□□□□ -0.71
PRPF3-206ENST00000493553 ATF7P17544 494 aaPredicted RBP10.64□□□□□ -0.71
PRPF3-206ENST00000493553 EIF4BP23588 611 aaKnown RBP10.64□□□□□ -0.71
PRPF3-206ENST00000493553 CHRNA3P32297 505 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 YARSP54577 528 aaKnown RBP10.64□□□□□ -0.71
PRPF3-206ENST00000493553 RAC1P63000 192 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 IGBP1P78318 339 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 RBP5P82980 135 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 SMC1AQ14683 1233 aaKnown RBP10.64□□□□□ -0.71
PRPF3-206ENST00000493553 CASP8Q14790 479 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 TUBB8Q3ZCM7 444 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 RASAL3Q86YV0 1011 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 THNSL1Q8IYQ7 743 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 OR5B17Q8NGF7 314 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 GPR152Q8TDT2 470 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 CAVIN3Q969G5 261 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 LRRC45Q96CN5 670 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 HHIPL1Q96JK4 782 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 ACAP3Q96P50 834 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 PCDHB18PQ96TA0 734 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 PSMB7Q99436 277 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 LRRC1Q9BTT6 524 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 HAPLN2Q9GZV7 340 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 IFT122Q9HBG6 1241 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 SPC25Q9HBM1 224 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 GDF3Q9NR23 364 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 FAM114A2Q9NRY5 505 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 ADAM22Q9P0K1 906 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 WDR35Q9P2L0 1181 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 PARP2Q9UGN5 583 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 UTP11Q9Y3A2 253 aaKnown RBP10.64□□□□□ -0.71
PRPF3-206ENST00000493553 NOC2LQ9Y3T9 749 aaKnown RBP10.64□□□□□ -0.71
PRPF3-206ENST00000493553 PCDHA3Q9Y5H8 950 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 MYH10P35580 1976 aa10.64□□□□□ -0.71
PRPF3-206ENST00000493553 SIP14410 1827 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 A0A087WZ62 844 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 MBLAC1A4D2B0 266 aaPredicted RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 PODXLO00592 558 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 NDC80O14777 642 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 DDX3YO15523 660 aaKnown RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 FGGP02679 453 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 ELNP15502 786 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 CTNNA1P35221 906 aaKnown RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 TNNT3P45378 269 aaPredicted RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 AARSP49588 968 aaKnown RBP eCLIP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 DRG2P55039 364 aaKnown RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 LACTBP83111 547 aaPredicted RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 MYO1EQ12965 1108 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 MTMR3Q13615 1198 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 LRRC38Q5VT99 294 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 TAF2Q6P1X5 1199 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 NOTUMQ6P988 496 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 C17orf99Q6UX52 265 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 SYDE1Q6ZW31 735 aaPredicted RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 KIAA0319LQ8IZA0 1049 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 UBR7Q8N806 425 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 FAM71BQ8TC56 605 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 AENQ8WTP8 325 aaKnown RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 USP6NLQ92738 828 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 ARHGEF26Q96DR7 871 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 RNPC3Q96LT9 517 aaKnown RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 RUFY1Q96T51 708 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 KRT12Q99456 494 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 PTPN18Q99952 460 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 NCAPGQ9BPX3 1015 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 FDXACB1Q9BRP7 624 aaPredicted RBP10.63□□□□□ -0.71
PRPF3-206ENST00000493553 PI4K2AQ9BTU6 479 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 MTMR12Q9C0I1 747 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 TSPYL1Q9H0U9 437 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 LHX5Q9H2C1 402 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 R3HDMLQ9H3Y0 253 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 OSGEPQ9NPF4 335 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 CISHQ9NSE2 258 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 TAS2R14Q9NYV8 317 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 IP6K2Q9UHH9 426 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 NUB1Q9Y5A7 615 aa10.63□□□□□ -0.71
PRPF3-206ENST00000493553 MROH7Q68CQ1 1323 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 DYNC1LI2O43237 492 aaPredicted RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 SART1O43290 800 aaKnown RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 PSTPIP1O43586 416 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 PROSCO94903 275 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 HEXIM1O94992 359 aaKnown RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 FAM163BP0C2L3 166 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 ZNF286BP0CG31 522 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 DESP17661 470 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 CDH5P33151 784 aaPredicted RBP10.62□□□□□ -0.71
PRPF3-206ENST00000493553 SCNN1AP37088 669 aa10.62□□□□□ -0.71
PRPF3-206ENST00000493553 FNTAP49354 379 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms