RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.16□□□□□ -1.74
PTCD3-218ENST00000493430 CDC42BPGQ6DT37 1551 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 LINC01548A6NM66 108 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 PCDHGA12O60330 932 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 SOAT2O75908 522 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 CHEK2O96017 543 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 MT-CO1P00395 513 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 RHOP08100 348 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 ZFXP17010 805 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-218ENST00000493430 MALP21145 153 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 LPOP22079 712 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-218ENST00000493430 SMARCA1P28370 1054 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 NDUFV1P49821 464 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 TFF2Q03403 129 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 EIF2B5Q13144 721 aaKnown RBP4.16□□□□□ -1.74
PTCD3-218ENST00000493430 BMPR2Q13873 1038 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 KHDC1Q4VXA5 237 aaKnown RBP4.16□□□□□ -1.74
PTCD3-218ENST00000493430 MTX3Q5HYI7 312 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 ZNF366Q8N895 744 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 VGLL2Q8N8G2 317 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 Q8N9P0 234 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-218ENST00000493430 NSUN6Q8TEA1 469 aaKnown RBP4.16□□□□□ -1.74
PTCD3-218ENST00000493430 FKBP10Q96AY3 582 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 VRK1Q99986 396 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-218ENST00000493430 ACTRT3Q9BYD9 372 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 RLIMQ9NVW2 624 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 EHD3Q9NZN3 535 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 CFAP97Q9P2B7 532 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 PCDHGA9Q9Y5G4 932 aaKnown RBP4.16□□□□□ -1.74
PTCD3-218ENST00000493430 PCDHGA8Q9Y5G5 932 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 PCDHGA7Q9Y5G6 932 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 PCDHGA6Q9Y5G7 932 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 PCDHGA3Q9Y5H0 932 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 ZNF804BA4D1E1 1349 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 SBF2Q86WG5 1849 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 RAB3GAP2Q9H2M9 1393 aa4.15□□□□□ -1.74
PTCD3-218ENST00000493430 MST1RQ04912 1400 aa4.15□□□□□ -1.74
PTCD3-218ENST00000493430 TARM1B6A8C7 271 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 F2RL2O00254 374 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 HNRNPCP07910 306 aaKnown RBP eCLIP4.15□□□□□ -1.752e-6■□□□□ 11.2
PTCD3-218ENST00000493430 GJB1P08034 283 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 EBLN1P0CF75 366 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 MYBL2P10244 700 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 ITGALP20701 1170 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 PSMC1P62191 440 aaKnown RBP4.15□□□□□ -1.75
PTCD3-218ENST00000493430 SNAPC2Q13487 334 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 HABP2Q14520 560 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-218ENST00000493430 TMEM119Q4V9L6 283 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 SYDE2Q5VT97 1194 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 CNPPD1Q9BV87 410 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 SEMA4CQ9C0C4 833 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 SIK2Q9H0K1 926 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 SERTAD4Q9NUC0 356 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 RGS17Q9UGC6 210 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-218ENST00000493430 TNS1Q9HBL0 1735 aaKnown RBP4.15□□□□□ -1.75
PTCD3-218ENST00000493430 KIAA1210Q9ULL0 1709 aa4.15□□□□□ -1.75
PTCD3-218ENST00000493430 SPATA31E1Q6ZUB1 1445 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 ZNF785A8K8V0 405 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 FAM163BP0C2L3 166 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 PRR35P0CG20 571 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 NDUFB7P17568 137 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 DRD4P21917 467 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 KELP23276 732 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 CTGFP29279 349 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 KRT85P78386 507 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 SSBP2P81877 361 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-218ENST00000493430 TBCCQ15814 346 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 UAP1L1Q3KQV9 507 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 RBM20Q5T481 1227 aaKnown RBP4.14□□□□□ -1.75
PTCD3-218ENST00000493430 TAF2Q6P1X5 1199 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 SLC4A10Q6U841 1118 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 ZNF782Q6ZMW2 699 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-218ENST00000493430 ZNF551Q7Z340 670 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-218ENST00000493430 PSD4Q8NDX1 1056 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 FAM136AQ96C01 138 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 TEKT5Q96M29 485 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 SMOC2Q9H3U7 446 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 GPR35Q9HC97 309 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 ETAA1Q9NY74 926 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 DKK3Q9UBP4 350 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 ATP8A1Q9Y2Q0 1164 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-218ENST00000493430 MON2Q7Z3U7 1717 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 ADGRF5Q8IZF2 1346 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 ADGRB1O14514 1584 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 GLI3P10071 1580 aa4.14□□□□□ -1.75
PTCD3-218ENST00000493430 ADGRL3Q9HAR2 1447 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 PIK3C2AO00443 1686 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 NWD2Q9ULI1 1742 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 SHTN1A0MZ66 631 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 NT5C1B-RDH14C9J2C7 533 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 JTBO76095 146 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 NXPH3O95157 252 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 CD6P30203 668 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 ALDH9A1P49189 494 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 ZNF135P52742 658 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-218ENST00000493430 DSC2Q02487 901 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 ABCB5Q2M3G0 1257 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 SLC44A4Q53GD3 710 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 ZNF626Q68DY1 528 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms