RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 NELL1Q92832 810 aa16.05■□□□□ 0.16
CDC42SE1-205ENST00000491825 TMEM209Q96SK2 561 aa16.05■□□□□ 0.16
CDC42SE1-205ENST00000491825 NELL2Q99435 816 aa16.05■□□□□ 0.16
CDC42SE1-205ENST00000491825 TRMT61BQ9BVS5 477 aaKnown RBP16.05■□□□□ 0.16
CDC42SE1-205ENST00000491825 BRD9Q9H8M2 597 aa16.05■□□□□ 0.16
CDC42SE1-205ENST00000491825 ZNF334Q9HCZ1 680 aaPredicted RBP16.05■□□□□ 0.16
CDC42SE1-205ENST00000491825 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
CDC42SE1-205ENST00000491825 SPATA6Q9NWH7 488 aaPredicted RBP16.05■□□□□ 0.16
CDC42SE1-205ENST00000491825 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDC42SE1-205ENST00000491825 LAMTOR5O43504 91 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 ZNF18P17022 549 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 PSMC3P17980 439 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 FMO5P49326 533 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 MYL6P60660 151 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 PLD1Q13393 1074 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 SGSM1Q2NKQ1 1148 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 ZNF699Q32M78 642 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 ZNF852Q6ZMS4 543 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 TMEM86AQ8N2M4 240 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 ATAD1Q8NBU5 361 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 ZBTB44Q8NCP5 570 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 DEPDC1BQ8WUY9 529 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 RSPRY1Q96DX4 576 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 FAXDC2Q96IV6 333 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 IMPG2Q9BZV3 1241 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 MMRN2Q9H8L6 949 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 PRMT8Q9NR22 394 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 MAGEC2Q9UBF1 373 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 CACNA1IQ9P0X4 2223 aa16.04■□□□□ 0.16
CDC42SE1-205ENST00000491825 PATJQ8NI35 1801 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 A0A1W2PRU2 124 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 KCNJ18B7U540 433 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 CYB561D2O14569 222 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 HUS1O60921 280 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 FAM163BP0C2L3 166 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 GDI1P31150 447 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 MYL7Q01449 175 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 KCNH2Q12809 1159 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 KCNJ12Q14500 433 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 MAN2A1Q16706 1144 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 TCP11X2Q5H9J9 407 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 STXBP5Q5T5C0 1151 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 MFSD6LQ8IWD5 586 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 DHX40Q8IX18 779 aaKnown RBP16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 AOPEPQ8N6M6 819 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 IRF7Q92985 503 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 HSD3B7Q9H2F3 369 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 FANCLQ9NW38 375 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 RAB20Q9NX57 234 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 HSFX1Q9UBD0 423 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 L1RE1Q9UN81 338 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 SLC27A5Q9Y2P5 690 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 MRPS17Q9Y2R5 130 aaKnown RBP16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 SNX9Q9Y5X1 595 aa16.03■□□□□ 0.16
CDC42SE1-205ENST00000491825 FANCMQ8IYD8 2048 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 CACNA1AO00555 2505 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 GTPBP10A4D1E9 387 aaKnown RBP16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 SMTNL1A8MU46 457 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 NCAM2O15394 837 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 SOAT2O75908 522 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 MTIF2P46199 727 aaKnown RBP16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 ZNF445P59923 1031 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 TNNC1P63316 161 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 NOP14P78316 857 aaKnown RBP16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 FOXK2Q01167 660 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 FCHO2Q0JRZ9 810 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 CETN1Q12798 172 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 IQCB1Q15051 598 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 WDR72Q3MJ13 1102 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 ZNF667Q5HYK9 610 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 LRSAM1Q6UWE0 723 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 GAREM2Q75VX8 874 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 PDCL2Q8N4E4 241 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 CCDC150Q8NCX0 1101 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 PSMG2Q969U7 264 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 GPR88Q9GZN0 384 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 CHRDQ9H2X0 955 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 PCDHGA2Q9Y5H1 932 aa16.02■□□□□ 0.16
CDC42SE1-205ENST00000491825 MIA3Q5JRA6 1907 aa16.02■□□□□ 0.15
CDC42SE1-205ENST00000491825 HEPACAM2A8MVW5 462 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 MAN2B1O00754 1011 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 GABRDO14764 452 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 LILRB5O75023 590 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 TACC1O75410 805 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 TDGF1P13385 188 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 P4HA1P13674 534 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 ATF6P18850 670 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 ASPAP45381 313 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 ALDH1A3P47895 512 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 ID4P47928 161 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 EPHB3P54753 998 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 CSTF1Q05048 431 aaKnown RBP16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 MTAPQ13126 283 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 SOWAHAQ2M3V2 549 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 MIIPQ5JXC2 388 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 MAMSTRQ6ZN01 415 aa16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 DNAJB7Q7Z6W7 309 aaPredicted RBP16.01■□□□□ 0.15
CDC42SE1-205ENST00000491825 METTL23Q86XA0 190 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms