RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ELMSAN1Q6PJG2 1045 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 DCLRE1AQ6PJP8 1040 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 CD300LGQ6UXG3 332 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 CRELD2Q6UXH1 353 aaPredicted RBP8.12□□□□□ -1.11
CLDN1-202ENST00000490800 CYP26C1Q6V0L0 522 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 CEP120Q8N960 986 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 CPLX3Q8WVH0 158 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 RSAD2Q8WXG1 361 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 SMG7Q92540 1137 aaKnown RBP8.12□□□□□ -1.11
CLDN1-202ENST00000490800 MYADMQ96S97 322 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 PRRX2Q99811 253 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 CLSTN3Q9BQT9 956 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 FAM213AQ9BRX8 229 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 CRACR2AQ9BSW2 395 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 TCHPQ9BT92 498 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 TTPALQ9BTX7 342 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 MSTO1Q9BUK6 570 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 NUP58Q9BVL2 599 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 LSM14BQ9BX40 385 aaKnown RBP8.12□□□□□ -1.11
CLDN1-202ENST00000490800 RHOBTB2Q9BYZ6 727 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 KIAA1586Q9HCI6 787 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 PTPRHQ9HD43 1115 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 ANKFY1Q9P2R3 1169 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 AGO2Q9UKV8 859 aaKnown RBP8.12□□□□□ -1.11
CLDN1-202ENST00000490800 PYCARDQ9ULZ3 195 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 TNFSF13BQ9Y275 285 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 ZKSCAN5Q9Y2L8 839 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 MYO10Q9HD67 2058 aa8.12□□□□□ -1.11
CLDN1-202ENST00000490800 SF3B1O75533 1304 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 SMIM28A0A1B0GU29 152 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 TTC26A0AVF1 554 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 GTPBP10A4D1E9 387 aaKnown RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ZNF233A6NK53 670 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 LRRIQ3A6PVS8 624 aaPredicted RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 H0Y858 1186 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 EPHB6O15197 1021 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 CLDN3O15551 220 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ADAM12O43184 909 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 NARSO43776 548 aaKnown RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 FAM189A1O60320 539 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 B3GAT3O94766 335 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 NOL4O94818 638 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 HARSP12081 509 aaKnown RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 MATR3P43243 847 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ACOT2P49753 483 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 CREMQ03060 361 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 PPP3CAQ08209 521 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ELAVL2Q12926 359 aaKnown RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 CBWD6Q4V339 395 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 FIGNQ5HY92 759 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 CBWD3Q5JTY5 395 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 CBWD5Q5RIA9 395 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 TMEM214Q6NUQ4 689 aaKnown RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 MPZL3Q6UWV2 235 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ALKAL1Q6UXT8 129 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 GBP6Q6ZN66 633 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ZSCAN30Q86W11 494 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 TMEM139Q8IV31 216 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 SLC44A3Q8N4M1 653 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 TMEM105Q8N8V8 129 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 FLCNQ8NFG4 579 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ST13P5Q8NFI4 369 aaPredicted RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 PARD3BQ8TEW8 1205 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 PIK3R5Q8WYR1 880 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ATOH1Q92858 354 aaPredicted RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 IQCDQ96DY2 449 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 PPP1R10Q96QC0 940 aaKnown RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 PANX2Q96RD6 677 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 CDT1Q9H211 546 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 GANQ9H2C0 597 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 MFSD1Q9H3U5 465 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 MMRN2Q9H8L6 949 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 GOLGA2P5Q9HBQ8 144 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 FAM207AQ9NSI2 230 aaPredicted RBP8.11□□□□□ -1.11
CLDN1-202ENST00000490800 FAM86C1Q9NVL1 165 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ZDHHC7Q9NXF8 308 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 IGSF9Q9P2J2 1179 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 CAPN11Q9UMQ6 739 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ZNF232Q9UNY5 417 aa8.11□□□□□ -1.11
CLDN1-202ENST00000490800 ZNF318Q5VUA4 2279 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 CLUHO75153 1309 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 A0A1W2PQJ5 194 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 I3L4J1 428 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 CDK2AP1O14519 115 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 OGTO15294 1046 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 PMM2O15305 246 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 PI15O43692 258 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 PAPLNO95428 1278 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 LDHAP00338 332 aaKnown RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 TPM1P09493 284 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 SKILP12757 684 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 LAMP2P13473 410 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 NPR3P17342 541 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 TRIM21P19474 475 aaKnown RBP8.1□□□□□ -1.11
CLDN1-202ENST00000490800 SLC9A1P19634 815 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 FGFR3P22607 806 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 PON1P27169 355 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 OR1D2P34982 312 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 KRT9P35527 623 aa8.1□□□□□ -1.11
CLDN1-202ENST00000490800 BRCC3P46736 316 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms